Corymbolone - Compound Card

Corymbolone

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Corymbolone

Structure
Zoomed Structure
  • Family: Plantae - Cyperaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Sesquiterpene
Canonical Smiles CC(=C)[C@@H]1CC[C@@]2([C@](C1)(O)[C@@H](C)CCC2=O)C
InChI InChI=1S/C15H24O2/c1-10(2)12-7-8-14(4)13(16)6-5-11(3)15(14,17)9-12/h11-12,17H,1,5-9H2,2-4H3/t11-,12+,14-,15+/m0/s1
InChIKey BMGSSZITOGSORO-MYZSUADSSA-N
Formula C15H24O2
HBA 2
HBD 1
MW 236.35
Rotatable Bonds 1
TPSA 37.3
LogP 3.1
Number Rings 2
Number Aromatic Rings 0
Heavy Atom Count 17
Formal Charge 0
Fraction CSP3 0.8
Exact Mass 236.18
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Cyperus articulatus Cyperaceae Plantae 1352543

Showing of synonyms

  • Nyasse B, tih, et al. (1988). Isolation of α-corymbolol, an eudesmane sesquiterpene diol from Cyperus articulatus. Phytochemistry, 1988, 27(1), 179-181. [View]
Pubchem: 178931
Chebi: 65659
Nmrshiftdb2: 70071062
Metabolights: MTBLC65659

No compound-protein relationship available.

Structure

SMILES: O=C1CCCC(C12)CCCC2

Level: 0

Mol. Weight: 236.35 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.6
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.36
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.44

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.49
Plasma Protein Binding
51.36
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
11.32
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.25
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.39
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.56
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-0.24
Rat (Acute)
1.88
Rat (Chronic Oral)
1.43
Fathead Minnow
3.82
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
304.93
Hydration Free Energy
-5.92
Log(D) at pH=7.4
1.97
Log(P)
2.97
Log S
-2.77
Log(Vapor Pressure)
-3.95
Melting Point
112.22
pKa Acid
10.49
pKa Basic
6.45
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 3 0.9187
Corticosteroid-binding globulin P08185 CBG_HUMAN Homo sapiens 3 0.9069
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.8766
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.8423
Abscisic acid receptor PYR1 O49686 PYR1_ARATH Arabidopsis thaliana 3 0.8316
Retinoic acid receptor RXR-alpha P19793 RXRA_HUMAN Homo sapiens 3 0.7872
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7724
11-beta-hydroxysteroid dehydrogenase 1 P50172 DHI1_MOUSE Mus musculus 3 0.7712
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 2 0.7643
Abscisic acid receptor PYL9 Q84MC7 PYL9_ARATH Arabidopsis thaliana 3 0.7636
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7586
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.7576
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 2 0.7574
Aromatase P11511 CP19A_HUMAN Homo sapiens 3 0.7494
Retinoic acid receptor RXR-alpha P19793 RXRA_HUMAN Homo sapiens 3 0.7447
Progesterone receptor P06401 PRGR_HUMAN Homo sapiens 2 0.7309
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7267
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7256
Gastrotropin P51161 FABP6_HUMAN Homo sapiens 3 0.7248
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7215
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 2 0.7212
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7205
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7196
Abscisic acid receptor PYL10 Q8H1R0 PYL10_ARATH Arabidopsis thaliana 3 0.7193
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7192
Trichodiene synthase P13513 TRI5_FUSSP Fusarium sporotrichioides 2 0.7153
Abscisic acid receptor PYR1 O49686 PYR1_ARATH Arabidopsis thaliana 3 0.7136
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 2 0.7120
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7089
Progesterone receptor P06401 PRGR_HUMAN Homo sapiens 2 0.7070
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 2 0.7054
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7042

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