Bafoudiosbulbin F - Compound Card

Bafoudiosbulbin F

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Bafoudiosbulbin F

Structure
Zoomed Structure
  • Family: Plantae - Dipterocarpaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Clerodane Diterpene
Canonical Smiles COC(=O)[C@H]1C[C@@H]2OC(=O)[C@@]31CC[C@@]1([C@@]([C@@H]3C2)(C)C[C@H](OC1=O)c1cocc1)O
InChI InChI=1S/C21H24O8/c1-19-9-14(11-3-6-27-10-11)29-18(24)21(19,25)5-4-20-13(16(22)26-2)7-12(8-15(19)20)28-17(20)23/h3,6,10,12-15,25H,4-5,7-9H2,1-2H3/t12-,13+,14-,15-,19-,20+,21+/m0/s1
InChIKey YPRSTWCOPJVVJE-UXJQWXQXSA-N
Formula C21H24O8
HBA 8
HBD 1
MW 404.42
Rotatable Bonds 2
TPSA 112.27
LogP 1.91
Number Rings 6
Number Aromatic Rings 1
Heavy Atom Count 29
Formal Charge 0
Fraction CSP3 0.67
Exact Mass 404.15
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Dioscorea bulbifera Dioscoreaceae Plantae 35874
2 Monotes kerstingii Dipterocarpaceae Plantae 2029430

Showing of synonyms

  • Kuete V, Betrandteponno R, et al. (2012). Antibacterial activities of the extracts, fractions and compounds from Dioscorea bulbifera.. BMC complementary and alternative medicine,2012, 12, 228. [View] [PubMed]
  • Fotso GW, Mogue Kamdem L, et al. (2019). Antimicrobial secondary metabolites from the stem barks and leaves of Monotes kerstingii Gilg (Dipterocarpaceae).. Fitoterapia,2019, 137, 104239. [View] [PubMed]
Pubchem: 102479350
Nmrshiftdb2: 60032350

No compound-protein relationship available.

Structure

SMILES: c1occc1C(C2)OC(=O)C(CC3)C2C(C345)CC(CC5)OC4=O

Level: 1

Mol. Weight: 404.42 g/mol

Structure

SMILES: O=C1OC(CC2)CC(C123)C4C(CC3)C(=O)OCC4

Level: 0

Mol. Weight: 404.42 g/mol

Structure

SMILES: c1ccoc1

Level: 0

Mol. Weight: 404.42 g/mol

Antibacterial

Absorption

Caco-2 (logPapp)
-5.12
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.920
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.13

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.650
Plasma Protein Binding
51.94
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
7.210
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-0.390
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.770
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
5.610
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-30.530
Rat (Acute)
4.740
Rat (Chronic Oral)
2.170
Fathead Minnow
3.970
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
434.060
Hydration Free Energy
-4.140
Log(D) at pH=7.4
1.650
Log(P)
1.67
Log S
-4.25
Log(Vapor Pressure)
-9.2
Melting Point
236.01
pKa Acid
6.87
pKa Basic
4.76
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 3 0.8401
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.8294
Lactoperoxidase P80025 PERL_BOVIN Bos taurus 3 0.8234
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.8031
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.8022
Neocarzinostatin P0A3R9 NCZS_STRCZ Streptomyces carzinostaticus 3 0.7918
Purine nucleoside phosphorylase Q8I3X4 Q8I3X4_PLAF7 Plasmodium falciparum 3 0.7876
Multidrug efflux pump subunit AcrB P31224 ACRB_ECOLI Escherichia coli 3 0.7411
Purine nucleoside phosphorylase DeoD-type P0ABP9 DEOD_ECO57 Escherichia coli O157:H7 3 0.7394
Purine nucleoside phosphorylase DeoD-type Q5EEL8 DEOD_BACCE Bacillus cereus 3 0.7300
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7214
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7198
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 2 0.7182
L-lactate dehydrogenase A chain P04642 LDHA_RAT Rattus norvegicus 3 0.7172
Purine nucleoside phosphorylase DeoD-type Q5EEL8 DEOD_BACCE Bacillus cereus 3 0.7169
Caffeoyl-CoA O-methyltransferase Q40313 CAMT_MEDSA Medicago sativa 3 0.7161
Purine nucleoside phosphorylase DeoD-type P0ABP9 DEOD_ECO57 Escherichia coli O157:H7 3 0.7148
Serine/threonine-protein kinase PLK1 P53350 PLK1_HUMAN Homo sapiens 3 0.7079
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 2 0.7012

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