Canaliculatin - Compound Card

Canaliculatin

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Canaliculatin

Structure
Zoomed Structure
  • Family: Plantae - Ebenaceae
  • Kingdom: Plantae
  • Class: Coumarin
    • Subclass: Coumarin Quinone
Canonical Smiles o1c(=O)c(c(c2c(cccc12)C)O)C1=C(C(=O)c2c(C1=O)c(ccc2)O)C
InChI InChI=1S/C21H14O6/c1-9-5-3-8-13-14(9)19(24)17(21(26)27-13)15-10(2)18(23)11-6-4-7-12(22)16(11)20(15)25/h3-8,22,24H,1-2H3
InChIKey WSGCGASSDMLJCX-UHFFFAOYSA-N
Formula C21H14O6
HBA 6
HBD 2
MW 362.34
Rotatable Bonds 1
TPSA 104.81
LogP 3.37
Number Rings 4
Number Aromatic Rings 3
Heavy Atom Count 27
Formal Charge 0
Fraction CSP3 0.1
Exact Mass 362.08
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Diospyros bipindensis Ebenaceae Plantae 413723
2 Diospyros canaliculata Ebenaceae Plantae 2945278

Showing of synonyms

  • Lenta NB, Ngamgwe FR, et al. (2015). Compounds from Diospyros canaliculata (Ebenaceae) and their Antiparasitic Activities. Journal of Pure and Applied Chemistry, 2015, 6(2), 56–65. [View]
  • Cesari I, Queiroz EF, et al. (2013). Extensive phytochemical investigation of the polar constituents of Diospyros bipindensis Gürke traditionally used by Baka pygmies.. Phytochemistry,2013, 96, 279-287. [View] [PubMed]
Pubchem: 163081233
Nmrshiftdb2: 70072626

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)C(=O)C=C(C2=O)c(c3)c(=O)oc(c34)cccc4

Level: 1

Mol. Weight: 362.34 g/mol

Structure

SMILES: c1cccc(c12)C(=O)C=CC2=O

Level: 0

Mol. Weight: 362.34 g/mol

Structure

SMILES: c1cccc(c12)oc(=O)cc2

Level: 0

Mol. Weight: 362.34 g/mol

Anti-plasmodial

Absorption

Caco-2 (logPapp)
-4.6
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.690
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.12

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.580
Plasma Protein Binding
79.53
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
2.720
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.270
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.830
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
6.170
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-0.720
Rat (Acute)
2.830
Rat (Chronic Oral)
2.780
Fathead Minnow
4.970
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
500.320
Hydration Free Energy
-7.910
Log(D) at pH=7.4
2.630
Log(P)
3.46
Log S
-6.54
Log(Vapor Pressure)
-9.18
Melting Point
234.14
pKa Acid
7.53
pKa Basic
3.16
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.8695
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.8636
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 3 0.8544
Urokinase-type plasminogen activator P00749 UROK_HUMAN Homo sapiens 3 0.8540
FMN-dependent NAD(P)H:quinone oxidoreductase 1 Q9I5F3 AZOR1_PSEAE Pseudomonas aeruginosa 3 0.8375
[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial Q15119 PDK2_HUMAN Homo sapiens 3 0.8339
Carminomycin 4-O-methyltransferase DnrK Q06528 DNRK_STRPE Streptomyces peucetius 3 0.8275
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8274
Cytochrome P450 S6BVH1 S6BVH1_RHOER Rhodococcus erythropolis 3 0.8008
Seminal ribonuclease P00669 RNS_BOVIN Bos taurus 3 0.7842
Phenylalanine-4-hydroxylase P00439 PH4H_HUMAN Homo sapiens 3 0.7666
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 4 0.7607
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 4 0.7573
LysR-type regulatory protein Q7WT50 Q7WT50_9BURK Burkholderia sp. DNT 3 0.7535
Pol protein Q000H7 Q000H7_9HIV1 Human immunodeficiency virus 1 3 0.7467
Acetylcholine-binding protein P58154 ACHP_LYMST Lymnaea stagnalis 3 0.7426
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7373
Genome polyprotein Q2YHF0 POLG_DEN4T Dengue virus type 4 3 0.7364
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7360
Biflaviolin synthase CYP158A1 Q9KZF5 C1581_STRCO Streptomyces coelicolor / M145) 3 0.7349
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 4 0.7346
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7333
Ephrin type-B receptor 4 P54760 EPHB4_HUMAN Homo sapiens 3 0.7300
ADP compounds hydrolase NudE P45799 NUDE_ECOLI Escherichia coli 2 0.7267
[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial Q15119 PDK2_HUMAN Homo sapiens 3 0.7241
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7236
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.7226
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7213
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7162
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7126
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.7049
Gentisate 1,2-dioxygenase Q67FT0 Q67FT0_PSESE Pseudaminobacter salicylatoxidans 2 0.7041
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.7030
Cytidine and deoxycytidylate deaminase zinc-binding region Q82Y41 Q82Y41_NITEU Nitrosomonas europaea 3 0.7023

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