Eryvarin B - Compound Card

Eryvarin B

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Eryvarin B

Structure
Zoomed Structure
  • Family: Plantae - Leguminosae/Fabaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Isoflavone
Canonical Smiles CC(=CCc1cc2CC(O)C(Oc2c2c1OCC(C2=O)c1ccc(cc1)O)(C)C)C
InChI InChI=1S/C25H28O5/c1-14(2)5-6-16-11-17-12-20(27)25(3,4)30-24(17)21-22(28)19(13-29-23(16)21)15-7-9-18(26)10-8-15/h5,7-11,19-20,26-27H,6,12-13H2,1-4H3
InChIKey YETRVFYEIPEEPR-UHFFFAOYSA-N
Formula C25H28O5
HBA 5
HBD 2
MW 408.49
Rotatable Bonds 3
TPSA 75.99
LogP 4.33
Number Rings 4
Number Aromatic Rings 2
Heavy Atom Count 30
Formal Charge 0
Fraction CSP3 0.4
Exact Mass 408.19
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Erythrina mildbraedii Leguminosae/Fabaceae Plantae 2708827

Showing of synonyms

  • Tchokouaha RF, Alexi X, et al. (2010). Erymildbraedin A and B, two novel cytotoxic dimethylpyrano-isoflavones from the stem bark of Erythrina mildbraedii: evaluation of their activity toward endocrine cancer cells.. Journal of enzyme inhibition and medicinal chemistry,2010, 25(2), 228-233. [View] [PubMed]
Pubchem: 101010400
Nmrshiftdb2: 70034558

No compound-protein relationship available.

Structure

SMILES: O1CCCc(c1c23)ccc2OCC(C3=O)c4ccccc4

Level: 1

Mol. Weight: 408.49 g/mol

Structure

SMILES: O1CCCc(c1c23)ccc2OCCC3=O

Level: 0

Mol. Weight: 408.49 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 408.49 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.92
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.76
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-1.87

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.12
Plasma Protein Binding
55.46
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
7.41
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.32
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.51
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.9
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-20.4
Rat (Acute)
2.85
Rat (Chronic Oral)
1.97
Fathead Minnow
5.01
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
481.65
Hydration Free Energy
-5.5
Log(D) at pH=7.4
3.44
Log(P)
5.02
Log S
-5.28
Log(Vapor Pressure)
-9.26
Melting Point
175.2
pKa Acid
8.57
pKa Basic
5.68
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Histone deacetylase 4 P56524 HDAC4_HUMAN Homo sapiens 3 0.9240
DNA gyrase subunit A P0AES5 GYRA_SHIFL Shigella flexneri 3 0.9048
prolyl oligopeptidase Q9X6R4 Q9X6R4_AERCA Aeromonas caviae 3 0.9005
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.8961
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.8694
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 3 0.8665
Vitamin D(3) 25-hydroxylase C4B644 CPVDH_PSEAH Pseudonocardia autotrophica 3 0.8430
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.8017
Coagulation factor X P00742 FA10_HUMAN Homo sapiens 3 0.7821
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7729
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 3 0.7616
Phosphatidylinositol 3-kinase catalytic subunit type 3 Q8NEB9 PK3C3_HUMAN Homo sapiens 4 0.7543
Catechol O-methyltransferase P22734 COMT_RAT Rattus norvegicus 3 0.7515
HLA class I histocompatibility antigen, B alpha chain P01889 HLAB_HUMAN Homo sapiens 3 0.7509
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.7502
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 2 0.7432
Pteridine reductase O76290 O76290_TRYBB Trypanosoma brucei brucei 2 0.7424
3-hydroxyanthranilate 3,4-dioxygenase Q1LCS4 3HAO_CUPMC Cupriavidus metallidurans 2 0.7375
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 3 0.7346
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 2 0.7254
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 3 0.7239
Avidin P02701 AVID_CHICK Gallus gallus 2 0.7192
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7187
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 2 0.7163
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 2 0.7163
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.7140
Formylmethanofuran--tetrahydromethanopterin formyltransferase Q49610 FTR_METKA Methanopyrus kandleri 3 0.7122
prolyl oligopeptidase Q9X6R4 Q9X6R4_AERCA Aeromonas caviae 3 0.7100
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 3 0.7051
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7038
Lethal(3)malignant brain tumor-like protein 1 Q9Y468 LMBL1_HUMAN Homo sapiens 3 0.7018
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.7000

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