Daidzein7-O-beta-D-glucopyranoside - Compound Card

Daidzein7-O-beta-D-glucopyranoside

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Daidzein7-O-beta-D-glucopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Leguminosae/Fabaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Isoflavone
Canonical Smiles OC[C@H]1O[C@@H](Oc2ccc3c(c2)occ(c3=O)c2ccc(cc2)O)[C@@H]([C@H]([C@@H]1O)O)O
InChI InChI=1S/C21H20O9/c22-8-16-18(25)19(26)20(27)21(30-16)29-12-5-6-13-15(7-12)28-9-14(17(13)24)10-1-3-11(23)4-2-10/h1-7,9,16,18-23,25-27H,8H2/t16-,18-,19+,20-,21-/m1/s1
InChIKey KYQZWONCHDNPDP-QNDFHXLGSA-N
Formula C21H20O9
HBA 9
HBD 5
MW 416.38
Rotatable Bonds 4
TPSA 149.82
LogP 0.34
Number Rings 4
Number Aromatic Rings 3
Heavy Atom Count 30
Formal Charge 0
Fraction CSP3 0.29
Exact Mass 416.11
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Erythrina addisoniae Leguminosae/Fabaceae Plantae 2590682

Showing of synonyms

  • Talla E, Yankep E, et al. (2014). Chemical constituents from root barks of Erythrina mildbraedii and stem barks of Erythrina addisoniae. Bull. Chem. Soc. Ethiop. 2014, 28(1), 155-159. [View]
Pubchem: 107971
Kegg Ligand: C10216
Chebi: 42202
Nmrshiftdb2: 60022415
Metabolights: MTBLC42202
Drugbank: DB02115
Pdb Ligand: DZN
Bindingdb: 50409029
CPRiL: 34149
Structure

SMILES: O1CCCCC1Oc(cc2)cc(c23)occ(c3=O)-c4ccccc4

Level: 2

Mol. Weight: 416.38 g/mol

Structure

SMILES: O=c1ccoc(c12)cc(cc2)OC3CCCCO3

Level: 1

Mol. Weight: 416.38 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)-c3ccccc3

Level: 1

Mol. Weight: 416.38 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 416.38 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 416.38 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 416.38 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.33
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.930
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-0.17

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.130
Plasma Protein Binding
91.84
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
8.260
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Safe
Bioconcentration Factor
-1.000
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.840
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.590
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-36.930
Rat (Acute)
2.720
Rat (Chronic Oral)
3.610
Fathead Minnow
4.160
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
539.000
Hydration Free Energy
-6.060
Log(D) at pH=7.4
1.030
Log(P)
0.19
Log S
-3.54
Log(Vapor Pressure)
-13.39
Melting Point
220.52
pKa Acid
5.98
pKa Basic
5.57
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.9666
Histone deacetylase 4 P56524 HDAC4_HUMAN Homo sapiens 3 0.9500
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 3 0.9219
Tyrosine-protein kinase SYK P43405 KSYK_HUMAN Homo sapiens 3 0.9202
Lactoperoxidase A0A452E9Y6 PERL_CAPHI Capra hircus 3 0.9098
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8918
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.8877
TetR family transcriptional regulator Q58L87 Q58L87_MYCSM Mycolicibacterium smegmatis 3 0.8859
HTH-type transcriptional regulator TtgR Q9AIU0 TTGR_PSEPT Pseudomonas putida 3 0.8841
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8833
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 3 0.8823
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 3 0.8814
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.8660
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 3 0.8616
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8566
Transthyretin P02766 TTHY_HUMAN Homo sapiens 4 0.8322
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.8322
Fibroblast growth factor receptor 1 P11362 FGFR1_HUMAN Homo sapiens 3 0.8294
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 3 0.8283
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.8269
Tetracycline repressor protein class H P51561 TETR8_PASMD Pasteurella multocida 3 0.8267
Beta-lactamase Q9L5C8 Q9L5C8_ECOLX Escherichia coli 3 0.8235
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8199
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.8191
Enoyl-ACP reductase Q9BH77 Q9BH77_PLAFA Plasmodium falciparum 3 0.8176
Genome polyprotein P26663 POLG_HCVBK Hepatitis C virus genotype 1b 3 0.8154
Fatty acid-binding protein, intestinal P12104 FABPI_HUMAN Homo sapiens 3 0.8140
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8093
Cholinesterase P06276 CHLE_HUMAN Homo sapiens 3 0.8014
Squalene synthase P37268 FDFT_HUMAN Homo sapiens 3 0.7978
HTH-type transcriptional regulator EthR P9WMC1 ETHR_MYCTU Mycobacterium tuberculosis 3 0.7941
Gag-Pol polyprotein P03367 POL_HV1BR Human immunodeficiency virus type 1 group M subtype B 3 0.7892
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7881
4,4'-diapophytoene synthase A9JQL9 CRTM_STAAU Staphylococcus aureus 2 0.7870
17beta-hydroxysteroid dehydrogenase O93874 O93874_COCLU Cochliobolus lunatus 3 0.7846
Calmodulin P62157 CALM_BOVIN Bos taurus 3 0.7835
Aldehyde dehydrogenase, mitochondrial P05091 ALDH2_HUMAN Homo sapiens 4 0.7805
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7796
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7780
Tetracycline repressor protein class B from transposon Tn10 P04483 TETR2_ECOLX Escherichia coli 3 0.7757
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7686
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7666
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.7662
E3 ubiquitin-protein ligase Mdm2 Q00987 MDM2_HUMAN Homo sapiens 3 0.7656
Tubulin alpha chain D0VWZ0 D0VWZ0_SHEEP Ovis aries 3 0.7655
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 3 0.7654
17beta-hydroxysteroid dehydrogenase O93874 O93874_COCLU Cochliobolus lunatus 3 0.7653
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.7650
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 3 0.7635
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 2 0.7635
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7616
cGMP-dependent 3',5'-cyclic phosphodiesterase O00408 PDE2A_HUMAN Homo sapiens 3 0.7606
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7604
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 3 0.7599
Serine/threonine-protein kinase Chk2 O96017 CHK2_HUMAN Homo sapiens 3 0.7592
Protein ppBat Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron VPI-5482 2 0.7582
Gag-Pol polyprotein P04584 POL_HV2RO Human immunodeficiency virus type 2 subtype A 3 0.7571
Serine/threonine-protein kinase Nek2 P51955 NEK2_HUMAN Homo sapiens 3 0.7559
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.7544
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7528
Putative protease I Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron 2 0.7523
Biotin carboxylase P24182 ACCC_ECOLI Escherichia coli 4 0.7467
Serine/threonine-protein kinase Chk2 O96017 CHK2_HUMAN Homo sapiens 3 0.7466
Genome polyprotein P26663 POLG_HCVBK Hepatitis C virus genotype 1b 3 0.7429
1-deoxy-D-xylulose 5-phosphate reductoisomerase P45568 DXR_ECOLI Escherichia coli 2 0.7416
4-hydroxyphenylacetate 3-monooxygenase Q8YHT7 Q8YHT7_BRUME Brucella melitensis biotype 1 2 0.7413
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7412
Transthyretin P02767 TTHY_RAT Rattus norvegicus 3 0.7379
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.7373
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.7365
Agglutinin alpha chain P18674 LECA_MACPO Maclura pomifera 3 0.7361
UDP-galactopyranose mutase Q48485 GLF1_KLEPN Klebsiella pneumoniae 3 0.7355
4,4'-diapophytoene synthase A9JQL9 CRTM_STAAU Staphylococcus aureus 3 0.7350
Cytosolic purine 5'-nucleotidase P49902 5NTC_HUMAN Homo sapiens 2 0.7341
Ketimine reductase mu-crystallin O54983 CRYM_MOUSE Mus musculus 2 0.7338
Glycogen phosphorylase, muscle form P00489 PYGM_RABIT Oryctolagus cuniculus 3 0.7317
Proto-oncogene tyrosine-protein kinase Src P12931 SRC_HUMAN Homo sapiens 3 0.7311
Matrix metalloproteinase-9 P14780 MMP9_HUMAN Homo sapiens 2 0.7298
Serine/threonine-protein kinase Chk2 O96017 CHK2_HUMAN Homo sapiens 3 0.7292
Transthyretin P02767 TTHY_RAT Rattus norvegicus 2 0.7278
NmrA-like family domain-containing protein 1 Q9HBL8 NMRL1_HUMAN Homo sapiens 2 0.7265
3-hydroxyanthranilate 3,4-dioxygenase Q1LCS4 3HAO_CUPMC Cupriavidus metallidurans 2 0.7261
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 2 0.7256
Oxygenase Q194P4 Q194P4_STRAA Streptomyces argillaceus 3 0.7255
Farnesyl pyrophosphate synthase P14324 FPPS_HUMAN Homo sapiens 2 0.7255
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 3 0.7252
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7249
Transthyretin P02767 TTHY_RAT Rattus norvegicus 2 0.7242
Lethal(3)malignant brain tumor-like protein 1 Q9Y468 LMBL1_HUMAN Homo sapiens 3 0.7234
Glucose-1-phosphate thymidylyltransferase Q9HU22 Q9HU22_PSEAE Pseudomonas aeruginosa 3 0.7234
C-1-tetrahydrofolate synthase, cytoplasmic P11586 C1TC_HUMAN Homo sapiens 3 0.7219
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7214
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7185
Methylmalonyl-CoA decarboxylase P52045 SCPB_ECOLI Escherichia coli 3 0.7182
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 3 0.7178
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.7174
Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 Q9R1E6 ENPP2_MOUSE Mus musculus 3 0.7173
Disks large homolog 1 Q12959 DLG1_HUMAN Homo sapiens 3 0.7153
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.7136
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7114
Orotidine 5'-phosphate decarboxylase O26232 PYRF_METTH Methanothermobacter thermautotrophicus 4 0.7089
Nucleoprotein P33469 NCAP_CVHOC Human coronavirus OC43 3 0.7070
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7070
Casein kinase II subunit alpha P28523 CSK2A_MAIZE Zea mays 3 0.7069
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7068
Gag-Pol polyprotein P04584 POL_HV2RO Human immunodeficiency virus type 2 subtype A 3 0.7067
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 3 0.7058
ATP synthase subunit alpha, mitochondrial P19483 ATPA_BOVIN Bos taurus 2 0.7058
Catechol O-methyltransferase P22734 COMT_RAT Rattus norvegicus 3 0.7049
Carbonyl reductase [NADPH] 1 P16152 CBR1_HUMAN Homo sapiens 2 0.7049
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7048
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 3 0.7044
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7040
Major strawberry allergen Fra a 1-3 D0E0C7 FRA13_FRAAN Fragaria ananassa 4 0.7010
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7007
Fructose-1,6-bisphosphatase 1 P09467 F16P1_HUMAN Homo sapiens 2 0.7004
Formate--tetrahydrofolate ligase P21164 FTHS_MOOTH Moorella thermoacetica 2 0.7000

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