Rhombifoliamide - Compound Card

Rhombifoliamide

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Rhombifoliamide

Structure
Zoomed Structure
  • Family: Plantae - Malvaceae
  • Kingdom: Plantae
  • Class: Lipid
    • Subclass: Ceramide
Canonical Smiles CCCCCCCCCCCCCCCCCCCCCCC[C@@H](C(=O)N[C@@H](C([C@H](CCCCC/C=C/CCCCCCC)O)O)CO)O
InChI InChI=1S/C43H85NO5/c1-3-5-7-9-11-13-15-17-18-19-20-21-22-23-24-25-27-29-31-33-35-37-41(47)43(49)44-39(38-45)42(48)40(46)36-34-32-30-28-26-16-14-12-10-8-6-4-2/h16,26,39-42,45-48H,3-15,17-25,27-38H2,1-2H3,(H,44,49)/b26-16+/t39-,40+,41+,42?/m1/s1
InChIKey CTQCXVKPVHUEJO-NQOVULGNSA-N
Formula C43H85NO5
HBA 5
HBD 5
MW 696.16
Rotatable Bonds 39
TPSA 110.02
LogP 11.02
Number Rings 0
Number Aromatic Rings 0
Heavy Atom Count 49
Formal Charge 0
Fraction CSP3 0.93
Exact Mass 695.64
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Sida rhombifolia Malvaceae Plantae 108377

Showing of synonyms

  • Kamdoum BC, Simo I, et al. (2022). Chemical constituents of two Cameroonian medicinal plants: Sida rhombifolia L. and Sida acuta Burm. f. (Malvaceae) and their antiplasmodial activity.. Natural product research,2022, 36(20), 5311-5318. [View] [PubMed]
Pubchem: 171121061

No compound-protein relationship available.

No scaffolds available.

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.45
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-4.57
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
77.22

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.91
Plasma Protein Binding
74.81
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
-0.23
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-1.63
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.02
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
5.26
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-145376.04
Rat (Acute)
2.05
Rat (Chronic Oral)
4.03
Fathead Minnow
197.61
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
13851.08
Hydration Free Energy
-2.92
Log(D) at pH=7.4
5.85
Log(P)
15.42
Log S
-6.99
Log(Vapor Pressure)
-399.61
Melting Point
88.04
pKa Acid
8.54
pKa Basic
5.11
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.9029
Xylose isomerase P24300 XYLA_STRRU Streptomyces rubiginosus 3 0.8821
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.8752
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.8735
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 3 0.8470
Glycogenin-1 P46976 GLYG_HUMAN Homo sapiens 3 0.8449
Gag-Pol polyprotein P0C6F2 POL_HV1LW Human immunodeficiency virus type 1 group M subtype B 3 0.8336
Methionine aminopeptidase 2 P9WK19 MAP12_MYCTU Mycobacterium tuberculosis 3 0.8072
Lactose operon repressor P03023 LACI_ECOLI Escherichia coli 3 0.8010
Actin, alpha skeletal muscle P68135 ACTS_RABIT Oryctolagus cuniculus 3 0.7809
Laminarinase Q9WXN1 Q9WXN1_THEMA Thermotoga maritima 3 0.7732
Lysozyme C II P11941 LYSC2_ONCMY Oncorhynchus mykiss 3 0.7701
Lysosomal acid glucosylceramidase P04062 GLCM_HUMAN Homo sapiens 3 0.7645
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 4 0.7603
Iota toxin component Ia Q46220 Q46220_CLOPF Clostridium perfringens 3 0.7528
Procathepsin L P07711 CATL1_HUMAN Homo sapiens 4 0.7467
Regucalcin Q64374 RGN_MOUSE Mus musculus 3 0.7095
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7048
Beta-glucosidase 1A Q25BW5 BGL1A_PHACH Phanerodontia chrysosporium 3 0.7023
Lactose operon repressor P03023 LACI_ECOLI Escherichia coli 3 0.7008

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