Rubescin G - Compound Card

Rubescin G

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Rubescin G

Structure
Zoomed Structure
  • Family: Plantae - Meliaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Limonoid
Canonical Smiles OC1OC(=O)C(=C1)[C@@H]1CC2[C@]3([C@@]1(C)C[C@@H]1O[C@@]41[C@@]3(C)[C@H](O)[C@H]1[C@@H]3[C@]4(C)C(=O)C=C[C@]3(CO1)C)O2
InChI InChI=1S/C26H30O8/c1-21-6-5-13(27)23(3)18(21)17(31-10-21)19(29)24(4)25-14(33-25)8-12(11-7-16(28)32-20(11)30)22(25,2)9-15-26(23,24)34-15/h5-7,12,14-19,28-29H,8-10H2,1-4H3/t12-,14?,15-,16?,17+,18-,19+,21-,22-,23-,24-,25+,26+/m0/s1
InChIKey ZUJFGAIEJMOOII-ZJIPJQKMSA-N
Formula C26H30O8
HBA 8
HBD 2
MW 470.52
Rotatable Bonds 1
TPSA 118.12
LogP 1.04
Number Rings 8
Number Aromatic Rings 0
Heavy Atom Count 34
Formal Charge 0
Fraction CSP3 0.77
Exact Mass 470.19
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Trichilia rubescens Meliaceae Plantae 1672008

Showing of synonyms

  • Tsamo AT, Pagna JIM, et al. (2019). Rubescins F-H, new vilasinin-type limonoids from the leaves of Trichilia rubescens (Meliaceae).. Zeitschrift fur Naturforschung. C, Journal of biosciences,2019, 74(7-8), 175-182. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O=C1OCC=C1C(CC(C234)O4)C2CC5C6(O5)C3CC7C8C(CO7)C=CC(=O)C68

Level: 1

Mol. Weight: 470.52 g/mol

Structure

SMILES: C123C(O3)CCC1CC4C5(O4)C2CC6C7C(CO6)C=CC(=O)C57

Level: 0

Mol. Weight: 470.52 g/mol

Structure

SMILES: O=C1C=CCO1

Level: 0

Mol. Weight: 470.52 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.14
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.86
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-2.65

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.28
Plasma Protein Binding
36.84
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
10.39
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-0.38
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.02
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
7.13
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-514.53
Rat (Acute)
5.63
Rat (Chronic Oral)
1.67
Fathead Minnow
3.69
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Toxic
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
495.98
Hydration Free Energy
-2.94
Log(D) at pH=7.4
1.07
Log(P)
0.5
Log S
-4.03
Log(Vapor Pressure)
-9.3
Melting Point
248.42
pKa Acid
3.01
pKa Basic
2.58
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.7702

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