Rohituka 3 - Compound Card

Rohituka 3

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Rohituka 3

Structure
Zoomed Structure
  • Family: Plantae - Meliaceae
  • Kingdom: Plantae
  • Class: Limonoid
    • Subclass: Limonin
Canonical Smiles CC[C@H](C(C(=O)O[C@H]1[C@@H]2O[C@@H]3[C@@]([C@@H]2C(=C)[C@@]2([C@]1(C)C(CC2=O)c1cocc1)O)(C)[C@H]1CC(=O)OC[C@]1(OC(=O)C3)C)O)C
InChI InChI=1S/C32H40O11/c1-7-15(2)25(36)28(37)42-27-26-24(16(3)32(38)20(33)10-18(31(27,32)6)17-8-9-39-13-17)30(5)19-11-22(34)40-14-29(19,4)43-23(35)12-21(30)41-26/h8-9,13,15,18-19,21,24-27,36,38H,3,7,10-12,14H2,1-2,4-6H3/t15-,18?,19+,21+,24-,25?,26-,27+,29-,30-,31-,32-/m1/s1
InChIKey WQTDOKKJTKGBTA-BTQFQRCOSA-N
Formula C32H40O11
HBA 11
HBD 2
MW 600.66
Rotatable Bonds 5
TPSA 158.8
LogP 2.62
Number Rings 6
Number Aromatic Rings 1
Heavy Atom Count 43
Formal Charge 0
Fraction CSP3 0.69
Exact Mass 600.26
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Trichilia welwitschii Meliaceae Plantae 2709005

Showing of synonyms

  • Dzoyem JP, Tsamo AT, et al. (2015). Cytotoxicity, nitric oxide and acetylcholinesterase inhibitory activity of three limonoids isolated from Trichilia welwitschii (Meliaceae).. Biological research,2015, 48, 57. [View] [PubMed]
Pubchem: 153247
Nmrshiftdb2: 70121430

No compound-protein relationship available.

Structure

SMILES: c1occc1C(CC2=O)C(C23)CC4C(C3=C)C5C(O4)CC(=O)OC6C5CC(=O)OC6

Level: 1

Mol. Weight: 600.66 g/mol

Structure

SMILES: O=C1CCC(C12)CC3C(C2=C)C4C(O3)CC(=O)OC5C4CC(=O)OC5

Level: 0

Mol. Weight: 600.66 g/mol

Structure

SMILES: c1ccoc1

Level: 0

Mol. Weight: 600.66 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.39
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.78
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
8.05

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.65
Plasma Protein Binding
84.37
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
7.48
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.33
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.09
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
7.8
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-17999.15
Rat (Acute)
5.04
Rat (Chronic Oral)
2.67
Fathead Minnow
39.09
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
268.38
Hydration Free Energy
-2.92
Log(D) at pH=7.4
2.65
Log(P)
1.88
Log S
-4.56
Log(Vapor Pressure)
-10.94
Melting Point
237.12
pKa Acid
4.96
pKa Basic
3.31
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7692
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7684
3'-5' exoribonuclease Rv2179c P9WJ73 EXRBN_MYCTU Mycobacterium tuberculosis 3 0.7659
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7554
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7527
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7426
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7403
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 2 0.7122
Putative snRNP Sm-like protein Q8ZYG5 Q8ZYG5_PYRAE Pyrobaculum aerophilum 3 0.7096
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 3 0.7085
Prolyl tripeptidyl peptidase Q7MUW6 PTP_PORGI Porphyromonas gingivalis 2 0.7029
Genome polyprotein P26663 POLG_HCVBK Hepatitis C virus genotype 1b 3 0.7020
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7017

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