(6R)-1-O-deacetylkhayanolide E - Compound Card

(6R)-1-O-deacetylkhayanolide E

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(6R)-1-O-deacetylkhayanolide E

Structure
Zoomed Structure
  • Family: Plantae - Meliaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Limonoid
Canonical Smiles COC(=O)[C@@]([C@@]1(C)[C@@]2(C)C[C@]3([C@]1(C)C1CC[C@@]4([C@@]5([C@]1(C3[C@H](C2=O)O5)O)CC(=O)O[C@H]4c1ccoc1)C)O)(O)C
InChI InChI=1S/C29H36O10/c1-22-9-7-15-24(3)26(5,25(4,33)21(32)36-6)23(2)13-27(24,34)18-17(19(23)31)39-28(22,29(15,18)35)11-16(30)38-20(22)14-8-10-37-12-14/h8,10,12,15,17-18,20,33-35H,7,9,11,13H2,1-6H3/t15?,17-,18?,20+,22+,23+,24-,25+,26+,27+,28-,29+/m1/s1
InChIKey YCKKIPATAUTTDI-XSHCXDDQSA-N
Formula C29H36O10
HBA 10
HBD 3
MW 544.6
Rotatable Bonds 3
TPSA 152.73
LogP 1.84
Number Rings 7
Number Aromatic Rings 1
Heavy Atom Count 39
Formal Charge 0
Fraction CSP3 0.76
Exact Mass 544.23
Number of Lipinski Rule Violations 1
# Species Family Kingdom NCBI Taxonomy ID
1 Trichilia monadelpha Meliaceae Plantae 1640473

Showing of synonyms

  • Djoumessi AK, Nono RN, et al. (2023). Constituents of the Stem Bark of Trichilia monadelpha (Thonn.) J. J. De Wilde (Meliaceae) and Their Antibacterial and Antiplasmodial Activities. Metabolites 2023, 13, 298. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: c1occc1C(OC(=O)C2)C3CCC4C(C5C6C4C237)CC(C5)C(=O)C6O7

Level: 1

Mol. Weight: 544.6 g/mol

Structure

SMILES: O1C2C(=O)C(C3)CC(C3C2C4C156)C4CCC5COC(=O)C6

Level: 0

Mol. Weight: 544.6 g/mol

Structure

SMILES: c1ccoc1

Level: 0

Mol. Weight: 544.6 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.43
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.750
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
0.22

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.560
Plasma Protein Binding
85.96
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
2.730
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.710
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.380
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
7.330
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-2712.750
Rat (Acute)
5.170
Rat (Chronic Oral)
2.660
Fathead Minnow
8.310
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Toxic
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
411.860
Hydration Free Energy
-2.880
Log(D) at pH=7.4
2.260
Log(P)
1.87
Log S
-3.94
Log(Vapor Pressure)
-9.78
Melting Point
261.77
pKa Acid
5.23
pKa Basic
4.37
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Xylose isomerase P24300 XYLA_STRRU Streptomyces rubiginosus 3 0.7617
AcsD Q93AT8 Q93AT8_DICCH Dickeya chrysanthemi 3 0.7596
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7366
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7301
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 2 0.7289
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7268
Disks large homolog 1 Q12959 DLG1_HUMAN Homo sapiens 3 0.7038
Coagulation factor X P00742 FA10_HUMAN Homo sapiens 2 0.7002

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