Kaempferol 3-O-alpha-L-rhamnopyranoside - Compound Card

Kaempferol 3-O-alpha-L-rhamnopyranoside

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Kaempferol 3-O-alpha-L-rhamnopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Mimosaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavonol Glycoside
Canonical Smiles Oc1ccc(cc1)C1=C(O[C@H]2O[C@H](C)[C@H]([C@@H]([C@@H]2O)O)O)Cc2c(C1)cc(O)cc2O
InChI InChI=1S/C22H24O8/c1-10-19(26)20(27)21(28)22(29-10)30-18-9-15-12(6-14(24)8-17(15)25)7-16(18)11-2-4-13(23)5-3-11/h2-6,8,10,19-28H,7,9H2,1H3/t10-,19-,20+,21+,22-/m1/s1
InChIKey GVKJKYPSZSSISW-HJKBJEMGSA-N
Formula C22H24O8
HBA 8
HBD 6
MW 416.43
Rotatable Bonds 3
TPSA 139.84
LogP 1.16
Number Rings 4
Number Aromatic Rings 2
Heavy Atom Count 30
Formal Charge 0
Fraction CSP3 0.36
Exact Mass 416.15
Number of Lipinski Rule Violations 1
# Species Family Kingdom NCBI Taxonomy ID
1 Albizia zygia Mimosaceae Plantae 1179219

Showing of synonyms

  • Koagne RR, Annang F, et al. (2020). Cytotoxycity and antiplasmodial activity of phenolic derivatives from Albizia zygia (DC.) J.F. Macbr. (Mimosaceae).. BMC complementary medicine and therapies,2020, 20(1), 8. [View] [PubMed]
Pubchem: 5316673
Kegg Ligand: C16911
Chebi: 80790
Nmrshiftdb2: 60021811
Metabolights: MTBLC80790
Pdb Ligand: AFE
CPRiL: 55857
Structure

SMILES: c1ccccc1C(C2)=C(Cc(c23)cccc3)OC4CCCCO4

Level: 2

Mol. Weight: 416.43 g/mol

Structure

SMILES: c1cccc(c12)CC=C(C2)OC3CCCCO3

Level: 1

Mol. Weight: 416.43 g/mol

Structure

SMILES: c1ccccc1C(C2)=CCc(c23)cccc3

Level: 1

Mol. Weight: 416.43 g/mol

Structure

SMILES: C1C=CCc(c12)cccc2

Level: 0

Mol. Weight: 416.43 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 416.43 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 416.43 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-7.02
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.280
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-0.9

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.930
Plasma Protein Binding
79.46
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
12.650
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.280
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.780
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.280
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-27.850
Rat (Acute)
2.310
Rat (Chronic Oral)
3.830
Fathead Minnow
4.010
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
536.820
Hydration Free Energy
-8.600
Log(D) at pH=7.4
1.220
Log(P)
0.65
Log S
-3.57
Log(Vapor Pressure)
-10.82
Melting Point
199.78
pKa Acid
6.04
pKa Basic
6.03
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.9666
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.9312
Histone deacetylase 4 P56524 HDAC4_HUMAN Homo sapiens 3 0.9256
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.9233
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.9055
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.9042
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8995
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 4 0.8960
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.8915
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8902
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 3 0.8875
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.8863
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8833
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8787
Tyrosine-protein kinase JAK3 P52333 JAK3_HUMAN Homo sapiens 3 0.8777
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.8738
Ras-related protein Ral-B P11234 RALB_HUMAN Homo sapiens 3 0.8725
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8476
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 3 0.8455
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8450
HTH-type transcriptional regulator TtgR Q9AIU0 TTGR_PSEPT Pseudomonas putida 3 0.8418
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9QYJ6 PDE10_RAT Rattus norvegicus 4 0.8407
Botulinum neurotoxin type A P0DPI0 BXA1_CLOBO Clostridium botulinum 3 0.8386
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8357
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8299
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.8265
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.8191
Streptogramin A acetyltransferase P50870 VATD_ENTFC Enterococcus faecium 3 0.8130
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.8066
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.8040
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.8040
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7954
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7929
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase Q81LL4 MTNN_BACAN Bacillus anthracis 3 0.7918
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7914
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 3 0.7912
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7852
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7844
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 4 0.7776
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 3 0.7769
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7767
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 3 0.7689
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7669
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.7631
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 4 0.7628
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7608
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.7601
Glutathione S-transferase F2 P46422 GSTF2_ARATH Arabidopsis thaliana 4 0.7597
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 3 0.7549
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7539
Cyclic dipeptide N-prenyltransferase D1D8L6 D1D8L6_ASPFM Neosartorya fumigata 3 0.7531
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7514
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.7506
APH(2'')-Id O68183 O68183_ENTCA Enterococcus casseliflavus 3 0.7397
Dihydrofolate reductase P0ABQ4 DYR_ECOLI Escherichia coli 3 0.7385
FMN-dependent NAD(P)H:quinone oxidoreductase 1 Q9I5F3 AZOR1_PSEAE Pseudomonas aeruginosa 2 0.7375
Phosphodiesterase Q8WQX9 Q8WQX9_9TRYP Trypanosoma brucei 3 0.7341
Gag-Pol polyprotein P05896 POL_SIVM1 Simian immunodeficiency virus 3 0.7332
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.7332
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7320
HTH-type transcriptional regulator TtgR Q9AIU0 TTGR_PSEPT Pseudomonas putida 3 0.7314
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7308
Rhodopsin kinase GRK1 P28327 GRK1_BOVIN Bos taurus 3 0.7263
Heat shock protein HSP 90-beta P08238 HS90B_HUMAN Homo sapiens 3 0.7179
cGMP-dependent 3',5'-cyclic phosphodiesterase O00408 PDE2A_HUMAN Homo sapiens 2 0.7167
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7110
UDP-galactopyranose mutase Q48485 GLF1_KLEPN Klebsiella pneumoniae 4 0.7099
5-methylthioadenosine/S-adenosylhomocysteine deaminase Q7NZ90 Q7NZ90_CHRVO Chromobacterium violaceum 3 0.7079
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.7070
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7062
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.7037
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 3 0.7030
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7028
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7008

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