3-O-[alpha-L-arabinopyranosyl-(1 → 3)-beta-D-glucopyranosyl] cylicodiscic acid - Compound Card

3-O-[alpha-L-arabinopyranosyl-(1 → 3)-beta-D-glucopyranosyl] cylicodiscic acid

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3-O-[alpha-L-arabinopyranosyl-(1 → 3)-beta-D-glucopyranosyl] cylicodiscic acid

Structure
Zoomed Structure
  • Family: Plantae - Mimosaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Terpene Glycoside
Canonical Smiles OCC1OC(O[C@H]2CC[C@]3(C(C2(C)C)CC[C@@]2(C3CCC3[C@@]2(CO)CC[C@@]2(C3[C@@H](CC2)C(=C)C)C(=O)O)C)C)C(C(C1O)OC1OCC(C(C1O)O)O)O
InChI InChI=1S/C41H66O13/c1-20(2)21-9-14-40(36(49)50)15-16-41(19-43)22(28(21)40)7-8-26-38(5)12-11-27(37(3,4)25(38)10-13-39(26,41)6)53-35-32(48)33(30(46)24(17-42)52-35)54-34-31(47)29(45)23(44)18-51-34/h21-35,42-48H,1,7-19H2,2-6H3,(H,49,50)/t21-,22?,23?,24?,25?,26?,27-,28?,29?,30?,31?,32?,33?,34?,35?,38-,39+,40-,41-/m0/s1
InChIKey LQNGFZLUJCEDNJ-NKMDQEJESA-N
Formula C41H66O13
HBA 12
HBD 8
MW 766.97
Rotatable Bonds 8
TPSA 215.83
LogP 2.35
Number Rings 7
Number Aromatic Rings 0
Heavy Atom Count 54
Formal Charge 0
Fraction CSP3 0.93
Exact Mass 766.45
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Cylicodiscus gabunensis Mimosaceae Plantae 204972

Showing of synonyms

  • Tene M, Chabert P, et al. (2011). Triterpenoid saponins from Cylicodiscus gabunensis. Phytochemistry Letters, 2011, 4(2), 89-92. [View]

No compound-protein relationship available.

Structure

SMILES: C1CCC(C12)CCC3C2CCC4C3CCC5C4CCC(C5)OC(OCC6)CC6OC7CCCCO7

Level: 2

Mol. Weight: 766.97 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CCC4C3CCC5C4CCC(C5)OC6CCCCO6

Level: 1

Mol. Weight: 766.97 g/mol

Structure

SMILES: C1COCCC1OC2CCCCO2

Level: 1

Mol. Weight: 766.97 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CCC4C3CCC5C4CCCC5

Level: 0

Mol. Weight: 766.97 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 766.97 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.95
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
7.54
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
1778.13

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.0
Plasma Protein Binding
62.44
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
3.0
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-44.66
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.28
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
8.05
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-3227727.41
Rat (Acute)
3.35
Rat (Chronic Oral)
3.92
Fathead Minnow
4080.45
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
360017.38
Hydration Free Energy
-2.92
Log(D) at pH=7.4
2.31
Log(P)
2.63
Log S
-3.12
Log(Vapor Pressure)
-11754.47
Melting Point
241.43
pKa Acid
-48.06
pKa Basic
7.31
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.7904
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7507
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 3 0.7311
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 3 0.7310
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.7234
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7066
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7009

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