Dorsmanin D - Compound Card

Dorsmanin D

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Dorsmanin D

Structure
Zoomed Structure
  • Family: Plantae - Moraceae
  • Kingdom: Plantae
  • Class: Xanthone
Canonical Smiles COc1cc(ccc1O)c1oc2c(CC=C(C)C)c(O)c(c(c2c(=O)c1O)O)CC=C(C)C
InChI InChI=1S/C26H28O7/c1-13(2)6-9-16-21(28)17(10-7-14(3)4)26-20(22(16)29)23(30)24(31)25(33-26)15-8-11-18(27)19(12-15)32-5/h6-8,11-12,27-29,31H,9-10H2,1-5H3
InChIKey YRKLNCSPCWVPPC-UHFFFAOYSA-N
Formula C26H28O7
HBA 7
HBD 4
MW 452.5
Rotatable Bonds 6
TPSA 120.36
LogP 5.31
Number Rings 3
Number Aromatic Rings 3
Heavy Atom Count 33
Formal Charge 0
Fraction CSP3 0.27
Exact Mass 452.18
Number of Lipinski Rule Violations 1
# Species Family Kingdom NCBI Taxonomy ID
1 Dorstenia mannii Moraceae Plantae 194258

Showing of synonyms

  • Ngadjui BT, Kouam SF, et al. (2000). Prenylated flavonoids from the aerial parts of Dorstenia mannii.. Phytochemistry,2000, 55(8), 915-919. [View] [PubMed]
Pubchem: 10599726
Nmrshiftdb2: 70009390

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccccc3

Level: 1

Mol. Weight: 452.5 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 452.5 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 452.5 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.64
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-5.030
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-0.13

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
1.180
Plasma Protein Binding
86.82
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
5.940
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.100
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
1.240
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
6.890
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-73.120
Rat (Acute)
2.360
Rat (Chronic Oral)
3.120
Fathead Minnow
5.610
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Toxic

General Properties

Boiling Point
544.370
Hydration Free Energy
-3.860
Log(D) at pH=7.4
3.130
Log(P)
5.29
Log S
-6.62
Log(Vapor Pressure)
-9.13
Melting Point
195.18
pKa Acid
6.3
pKa Basic
6.85
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.9301
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.9134
Tyrosine-protein kinase Lck P06239 LCK_HUMAN Homo sapiens 4 0.9069
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 3 0.9007
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.8997
Histone deacetylase 4 P56524 HDAC4_HUMAN Homo sapiens 3 0.8979
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.8946
Anthocyanidin 3-O-glucosyltransferase UFGT P51094 UFOG_VITVI Vitis vinifera 5 0.8678
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 4 0.8674
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.8668
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.8668
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8628
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 5 0.8587
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.8567
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 3 0.8457
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8427
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8383
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.8370
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.8341
Anthocyanidin 3-O-glucosyltransferase UFGT P51094 UFOG_VITVI Vitis vinifera 4 0.8329
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 3 0.8228
Cyclin-dependent kinase 5 Q00535 CDK5_HUMAN Homo sapiens 5 0.8175
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 4 0.8174
Serine/threonine-protein kinase SKY1 Q03656 SKY1_YEAST Saccharomyces cerevisiae 3 0.8173
Phytohormone-binding protein CSBP A0A1S3THR8 PHBP_VIGRR Vigna radiata var. radiata 3 0.8142
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 3 0.8123
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.8089
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.8073
Hypoxanthine phosphoribosyltransferase Q4DRC4 Q4DRC4_TRYCC Trypanosoma cruzi 3 0.7983
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7905
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 3 0.7897
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7839
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 3 0.7739
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.7710
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7703
Genome polyprotein Q2YHF0 POLG_DEN4T Dengue virus type 4 3 0.7693
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 4 0.7685
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.7639
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 2 0.7602
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 2 0.7602
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.7584
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.7575
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 2 0.7566
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.7564
Purine nucleoside phosphorylase P00491 PNPH_HUMAN Homo sapiens 3 0.7541
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 3 0.7520
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.7513
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 3 0.7474
17beta-hydroxysteroid dehydrogenase O93874 O93874_COCLU Cochliobolus lunatus 4 0.7474
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7466
Major strawberry allergen Fra a 1-3 D0E0C7 FRA13_FRAAN Fragaria ananassa 5 0.7458
NADPH--cytochrome P450 reductase P00388 NCPR_RAT Rattus norvegicus 4 0.7453
Phosphodiesterase Q53I60 Q53I60_TRYCR Trypanosoma cruzi 4 0.7425
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.7405
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7403
Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase Q46381 BPHB_COMTE Comamonas testosteroni 3 0.7387
Genome polyprotein O92972 POLG_HCVJ4 Hepatitis C virus genotype 1b 3 0.7374
UDP-galactopyranose mutase Q48485 GLF1_KLEPN Klebsiella pneumoniae 3 0.7371
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 3 0.7369
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 3 0.7352
Nitric oxide synthase 1 P29476 NOS1_RAT Rattus norvegicus 4 0.7347
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7336
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 4 0.7322
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7320
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7313
Ribonuclease J H9CZL7 H9CZL7_DEIRD Deinococcus radiodurans 3 0.7303
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7292
NADPH--cytochrome P450 reductase P00388 NCPR_RAT Rattus norvegicus 4 0.7290
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7284
Eukaryotic translation initiation factor 4E-1 P29557 IF4E1_WHEAT Triticum aestivum 4 0.7282
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7281
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 4 0.7266
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 3 0.7251
Valacyclovir hydrolase Q86WA6 BPHL_HUMAN Homo sapiens 3 0.7245
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7244
S-adenosylmethionine decarboxylase proenzyme P17707 DCAM_HUMAN Homo sapiens 4 0.7191
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 4 0.7189
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7186
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7170
histidine kinase O32393 O32393_ARTPT Arthrospira platensis 3 0.7163
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 2 0.7152
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 5 0.7138
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.7134
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.7132
Serine/threonine-protein kinase PLK1 P53350 PLK1_HUMAN Homo sapiens 3 0.7123
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.7113
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.7113
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7079
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7077
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 3 0.7070
Casein kinase II subunit alpha P28523 CSK2A_MAIZE Zea mays 4 0.7057
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 3 0.7056
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7021
Histone-lysine N-methyltransferase SETD7 Q8WTS6 SETD7_HUMAN Homo sapiens 3 0.7008
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.7006
Tryptophan synthase alpha chain P00929 TRPA_SALTY Salmonella typhimurium 2 0.7005

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