Benjaminamide - Compound Card

Benjaminamide

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Benjaminamide

Structure
Zoomed Structure
  • Family: Plantae - Sapindaceae
  • Kingdom: Plantae
  • Class: Ceramide
    • Subclass: Ceramide Derivative
Canonical Smiles CCCCCCCCCCCCCCCCCCCCCC[C@H](C(=O)N[C@H]([C@@H]([C@@H](CCCCCCC/C=C/CCCCC)O)O)CO)O
InChI InChI=1S/C42H83NO5/c1-3-5-7-9-11-13-15-17-18-19-20-21-22-23-24-26-28-30-32-34-36-40(46)42(48)43-38(37-44)41(47)39(45)35-33-31-29-27-25-16-14-12-10-8-6-4-2/h12,14,38-41,44-47H,3-11,13,15-37H2,1-2H3,(H,43,48)/b14-12+/t38-,39+,40+,41-/m0/s1
InChIKey SOZSUYGVBDXLLZ-HSMPPUOJSA-N
Formula C42H83NO5
HBA 5
HBD 5
MW 682.13
Rotatable Bonds 38
TPSA 110.02
LogP 10.63
Number Rings 0
Number Aromatic Rings 0
Heavy Atom Count 48
Formal Charge 0
Fraction CSP3 0.93
Exact Mass 681.63
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Ficus mucuso Moraceae Plantae 309328
2 Ficus mucuso Moraceae Plantae 309328
3 Ficus benjamina Moraceae Plantae 182105
4 Chythrantus claneianus Sapindaceae Plantae
5 Pancovia pedicellaris Sapindaceae Plantae 1195016

Showing of synonyms

  • Soh R, Bankeu J, et al. (2009). Antibacterial Ellagic Acid Derivatives and Other Constituents from Pancovia pedicellaris. Zeitschrift für Naturforschung B. 2009, 64(9), 1070-1076. [View]
  • Simo C, Kouam S, et al. (2008). Benjaminamide: a new ceramide and other compounds from the twigs of Ficus benjamina (Moraceae).. Biochemical Systematics and Ecology, 2008, 36(3), 238-243. [View] [PubMed]
  • Bankeu JJ, Mustafa SA, et al. (2010). Ceramide and Cerebroside from the stem bark of Ficus mucuso (Moraceae).. Chemical & pharmaceutical bulletin,2010, 58(12), 1661-1665. [View] [PubMed]
  • Bankeu JJ, Khayala R, et al. (2011). Isoflavone dimers and other bioactive constituents from the figs of Ficus mucuso.. Journal of natural products,2011, 74(6), 1370-1378. [View] [PubMed]
  • Gojayev AS, Bankeu JJK, et al. (2013). Xanthine oxidase inhibitory activity of compounds from Chythrantus claneianus. Bangladesh J Pharmacol, 2013, 8(1), 78-83. [View]
Pubchem: 56662789
Chebi: 69751
Nmrshiftdb2: 60025757
Metabolights: MTBLC69751

No compound-protein relationship available.

No scaffolds available.

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.44
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-4.78
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
46.44

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.86
Plasma Protein Binding
80.22
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
-0.35
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-1.65
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.02
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
5.21
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-89410.54
Rat (Acute)
2.05
Rat (Chronic Oral)
3.98
Fathead Minnow
127.72
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
7546.59
Hydration Free Energy
-2.92
Log(D) at pH=7.4
5.71
Log(P)
14.78
Log S
-6.91
Log(Vapor Pressure)
-200.72
Melting Point
88.01
pKa Acid
8.37
pKa Basic
5.16
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.9020
Actin, alpha skeletal muscle P68135 ACTS_RABIT Oryctolagus cuniculus 3 0.8707
Ascorbate-specific PTS system EIIC component P39301 ULAA_ECOLI Escherichia coli 3 0.8674
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.8629
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 3 0.8417
Gag-Pol polyprotein P0C6F2 POL_HV1LW Human immunodeficiency virus type 1 group M subtype B 3 0.8378
Xylose isomerase P24300 XYLA_STRRU Streptomyces rubiginosus 3 0.8302
4-alpha-glucanotransferase O87172 MALQ_THETH Thermus thermophilus 3 0.8270
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.8110
Glycogenin-1 P46976 GLYG_HUMAN Homo sapiens 3 0.7992
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 3 0.7799
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7729
Beta-glucosidase Q8T0W7 Q8T0W7_9NEOP Neotermes koshunensis 3 0.7617
Beta-glucosidase A Q08638 BGLA_THEMA Thermotoga maritima 3 0.7445
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.7255
Sodium/potassium-transporting ATPase subunit alpha Q4H132 Q4H132_SQUAC Squalus acanthias 3 0.7150
Beta-glucosidase 1A Q25BW5 BGL1A_PHACH Phanerodontia chrysosporium 3 0.7133
Methionine aminopeptidase 1 P53582 MAP11_HUMAN Homo sapiens 2 0.7054
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7048

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