TDP-1 - Compound Card

TDP-1

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TDP-1

Structure
Zoomed Structure
  • Family: Fungi - Nectriaceae
  • Kingdom: Fungi
  • Class: Chromanone
    • Subclass: Chromanone Derivative
Canonical Smiles OCC(CC(=O)c1ccc2c(c1N)C(=O)CC(O2)(C)C)N
InChI InChI=1S/C15H20N2O4/c1-15(2)6-11(20)13-12(21-15)4-3-9(14(13)17)10(19)5-8(16)7-18/h3-4,8,18H,5-7,16-17H2,1-2H3
InChIKey COSICWYFCAPPJB-UHFFFAOYSA-N
Formula C15H20N2O4
HBA 6
HBD 3
MW 292.33
Rotatable Bonds 4
TPSA 115.64
LogP 0.91
Number Rings 2
Number Aromatic Rings 1
Heavy Atom Count 21
Formal Charge 0
Fraction CSP3 0.47
Exact Mass 292.14
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Fusarium sp. Nectriaceae Fungi 29916

Showing of synonyms

  • Kongue Tatong M, Talontsi F, et al. (2014). Banchromene and other secondary metabolites from the endophytic fungus Fusarium sp. obtained from Piper guineense inhibit the motility of phytopathogenic Plasmopara viticola zoospores. Tetrahedron Letters, 2014, 55(30), 4057-4061. [View]
Pubchem: 107777
Chebi: 174090
Nmrshiftdb2: 70073767
CPRiL: 183388
Structure

SMILES: c1cccc(c12)OCCC2=O

Level: 0

Mol. Weight: 292.33 g/mol

Toxin

Absorption

Caco-2 (logPapp)
-5.49
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.830
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.55

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.270
Plasma Protein Binding
21.49
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
5.050
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-0.920
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.480
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
7.440
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
1.740
Rat (Acute)
2.300
Rat (Chronic Oral)
2.360
Fathead Minnow
4.020
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
392.200
Hydration Free Energy
-14.890
Log(D) at pH=7.4
0.970
Log(P)
1.2
Log S
-1.76
Log(Vapor Pressure)
-8.36
Melting Point
173.98
pKa Acid
5.79
pKa Basic
6.02
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.9168
Cyclomaltodextrin glucanotransferase P05618 CDGT_BACS0 Bacillus sp 3 0.8725
Aminopeptidase N P15145 AMPN_PIG Sus scrofa 3 0.8714
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 3 0.8658
Purine nucleoside phosphorylase DeoD-type P0ABP9 DEOD_ECO57 Escherichia coli O157:H7 3 0.8623
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.8573
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.8446
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8423
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 3 0.8373
Nuclear receptor subfamily 1 group I member 3 O35627 NR1I3_MOUSE Mus musculus 3 0.8360
RNA-dependent RNA polymerase Q6A562 Q6A562_9VIRU Thosea asigna virus 3 0.8349
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8332
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.8310
3'-5' exoribonuclease Rv2179c P9WJ73 EXRBN_MYCTU Mycobacterium tuberculosis 3 0.8259
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.8231
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 3 0.8222
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.8177
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.8115
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.8098
Proline iminopeptidase O32449 PIP_SERMA Serratia marcescens 3 0.8021
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 3 0.7897
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7734
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7718
Proline iminopeptidase O32449 PIP_SERMA Serratia marcescens 3 0.7699
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 3 0.7688
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7667
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7549
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.7549
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 2 0.7510
Lethal(3)malignant brain tumor-like protein 1 Q9Y468 LMBL1_HUMAN Homo sapiens 3 0.7493
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.7477
Neocarzinostatin P0A3R9 NCZS_STRCZ Streptomyces carzinostaticus 3 0.7444
Beta-galactosidase P00722 BGAL_ECOLI Escherichia coli 3 0.7418
Steroid 17-alpha-hydroxylase/17,20 lyase P05093 CP17A_HUMAN Homo sapiens 3 0.7414
Proline iminopeptidase O32449 PIP_SERMA Serratia marcescens 3 0.7414
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7356
Gag-Pol polyprotein P05896 POL_SIVM1 Simian immunodeficiency virus 3 0.7340
Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial Q8N5Z0 AADAT_HUMAN Homo sapiens 2 0.7338
S-adenosylmethionine decarboxylase proenzyme P17707 DCAM_HUMAN Homo sapiens 3 0.7326
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7308
Methionine aminopeptidase 2 P9WK19 MAP12_MYCTU Mycobacterium tuberculosis 3 0.7277
Laminarinase Q9WXN1 Q9WXN1_THEMA Thermotoga maritima 3 0.7257
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7214
Periplasmic pH-dependent serine endoprotease DegQ P39099 DEGQ_ECOLI Escherichia coli 3 0.7192
Ribonucleoside-diphosphate reductase large chain 1 P21524 RIR1_YEAST Saccharomyces cerevisiae 4 0.7140
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.7125
Phenylalanine-4-hydroxylase P00439 PH4H_HUMAN Homo sapiens 3 0.7118
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.7112
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.7105
IAG-nucleoside hydrolase Q9GPQ4 Q9GPQ4_TRYVI Trypanosoma vivax 3 0.7098
Glucanase Q7LHI2 Q7LHI2_PHACH Phanerodontia chrysosporium 3 0.7091
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7065
Baculoviral IAP repeat-containing protein 8 Q96P09 BIRC8_HUMAN Homo sapiens 5 0.7041
Mitogen-activated protein kinase kinase kinase 5 Q99683 M3K5_HUMAN Homo sapiens 3 0.7041
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 2 0.7031
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7023
Ceramide transfer protein Q9Y5P4 CERT_HUMAN Homo sapiens 3 0.7020
Adenosine kinase Q9TVW2 ADK_TOXGO Toxoplasma gondii 3 0.7019

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