Podoscarpusflavone B - Compound Card

Podoscarpusflavone B

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Podoscarpusflavone B

Structure
Zoomed Structure
  • Family: Plantae - Ochnaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Biflavone
Canonical Smiles COc1ccc(cc1)c1cc(=O)c2c(o1)c(c(cc2O)O)c1cc(ccc1O)c1cc(=O)c2c(o1)cc(cc2O)OC
InChI InChI=1S/C32H22O10/c1-39-17-6-3-15(4-7-17)26-14-25(38)31-23(36)12-22(35)29(32(31)42-26)19-9-16(5-8-20(19)33)27-13-24(37)30-21(34)10-18(40-2)11-28(30)41-27/h3-14,33-36H,1-2H3
InChIKey GZTVUTQZSAZUIY-UHFFFAOYSA-N
Formula C32H22O10
HBA 10
HBD 4
MW 566.52
Rotatable Bonds 5
TPSA 159.8
LogP 5.74
Number Rings 6
Number Aromatic Rings 6
Heavy Atom Count 42
Formal Charge 0
Fraction CSP3 0.06
Exact Mass 566.12
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Campylospermum calanthum Ochnaceae Plantae 1321790

Showing of synonyms

  • Njock GBB, Bartholomeusz TA, et al. (2013). Structure and Dynamic of Three Indole Alkaloids from the Campylospermum Genus (Ochnaceae). HCA, 2013, 96, 1298-1304. [View]

No compound-protein relationship available.

Structure

SMILES: c1ccccc1-c(cc2=O)oc(c23)c(ccc3)-c4cc(ccc4)-c(cc5=O)oc(c56)cccc6

Level: 3

Mol. Weight: 566.52 g/mol

Structure

SMILES: O=c1ccoc(c12)c(ccc2)-c3cc(ccc3)-c(cc4=O)oc(c45)cccc5

Level: 2

Mol. Weight: 566.52 g/mol

Structure

SMILES: c1ccccc1-c(ccc2)c(c23)oc(cc3=O)-c4ccccc4

Level: 2

Mol. Weight: 566.52 g/mol

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccccc3

Level: 1

Mol. Weight: 566.52 g/mol

Structure

SMILES: O=c1ccoc(c12)c(ccc2)-c3ccccc3

Level: 1

Mol. Weight: 566.52 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 566.52 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 566.52 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.78
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-4.990
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
10.15

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.720
Plasma Protein Binding
94.31
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
5.660
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.410
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
1.130
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.760
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Toxic
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-15906.100
Rat (Acute)
2.480
Rat (Chronic Oral)
3.320
Fathead Minnow
41.630
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Toxic

General Properties

Boiling Point
519.030
Hydration Free Energy
-3.150
Log(D) at pH=7.4
4.930
Log(P)
6.59
Log S
-8.75
Log(Vapor Pressure)
-15.25
Melting Point
347.21
pKa Acid
11.68
pKa Basic
3.1
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.9747
Glycogen phosphorylase, muscle form P00489 PYGM_RABIT Oryctolagus cuniculus 3 0.9379
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.9298
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.9217
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.9207
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.9035
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Q04631 FNTA_RAT Rattus norvegicus 3 0.9015
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 3 0.8971
Caspase-6 P55212 CASP6_HUMAN Homo sapiens 3 0.8850
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.8848
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.8841
APH(2'')-Id O68183 O68183_ENTCA Enterococcus casseliflavus 4 0.8799
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 3 0.8723
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 4 0.8580
Anthocyanidin 3-O-glucosyltransferase UFGT P51094 UFOG_VITVI Vitis vinifera 4 0.8489
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 4 0.8341
Heat shock protein HSP 90-beta P08238 HS90B_HUMAN Homo sapiens 3 0.8300
Ephrin type-B receptor 2 P54763 EPHB2_MOUSE Mus musculus 3 0.8220
Serine/threonine-protein kinase toxin HipA P23874 HIPA_ECOLI Escherichia coli 3 0.8208
Annexin A5 P08758 ANXA5_HUMAN Homo sapiens 3 0.8184
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8175
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.8166
Geranylgeranyl transferase type-2 subunit alpha Q08602 PGTA_RAT Rattus norvegicus 3 0.8145
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.8145
O-methyltransferase family 2 D5STZ7 D5STZ7_PLAL2 Planctopirus limnophila 5 0.8106
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Q4WP27 Q4WP27_ASPFU Aspergillus fumigatus 3 0.8099
Insulin-degrading enzyme P14735 IDE_HUMAN Homo sapiens 3 0.8047
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.8034
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 5 0.8011
Flavin reductase (NADPH) P30043 BLVRB_HUMAN Homo sapiens 3 0.8003
Albumin P02768 ALBU_HUMAN Homo sapiens 4 0.7991
Cytosolic purine 5'-nucleotidase P49902 5NTC_HUMAN Homo sapiens 3 0.7943
Single-strand selective monofunctional uracil DNA glycosylase Q9YGN6 SMUG1_XENLA Xenopus laevis 4 0.7942
Focal adhesion kinase 1 Q05397 FAK1_HUMAN Homo sapiens 3 0.7940
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7879
Gag-Pol polyprotein P04584 POL_HV2RO Human immunodeficiency virus type 2 subtype A 4 0.7862
Seminal ribonuclease P00669 RNS_BOVIN Bos taurus 3 0.7854
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 3 0.7839
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.7819
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.7814
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7810
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 3 0.7795
Thymidylate synthase P0A886 TYSY_ECO57 Escherichia coli O157:H7 3 0.7751
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 4 0.7746
Multidrug-efflux transporter 1 regulator P39075 BMRR_BACSU Bacillus subtilis 4 0.7736
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7702
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7698
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 4 0.7648
Protein ppBat Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron VPI-5482 3 0.7619
Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase Q46381 BPHB_COMTE Comamonas testosteroni 3 0.7593
ADP-ribosyl-[dinitrogen reductase] hydrolase A7XNI2 A7XNI2_AZOBR Azospirillum brasilense 3 0.7593
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7575
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7561
Cell division cycle 7-related protein kinase O00311 CDC7_HUMAN Homo sapiens 4 0.7545
Serine/threonine-protein kinase SKY1 Q03656 SKY1_YEAST Saccharomyces cerevisiae 3 0.7545
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7538
Gag-Pol polyprotein P05896 POL_SIVM1 Simian immunodeficiency virus 3 0.7530
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.7524
DNA polymerase I Q5KWC1 Q5KWC1_GEOKA Geobacillus kaustophilus 4 0.7516
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7500
Prostaglandin reductase 1 Q14914 PTGR1_HUMAN Homo sapiens 4 0.7469
cGMP-specific 3',5'-cyclic phosphodiesterase O76074 PDE5A_HUMAN Homo sapiens 4 0.7450
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 3 0.7449
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7448
RAC-alpha serine/threonine-protein kinase P31749 AKT1_HUMAN Homo sapiens 3 0.7431
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 3 0.7430
Genome polyprotein O92972 POLG_HCVJ4 Hepatitis C virus genotype 1b 3 0.7429
Carbonic anhydrase 13 Q8N1Q1 CAH13_HUMAN Homo sapiens 3 0.7428
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7420
cAMP-dependent protein kinase catalytic subunit alpha P00517 KAPCA_BOVIN Bos taurus 4 0.7400
Tyrosine-protein kinase Lck P06239 LCK_HUMAN Homo sapiens 3 0.7399
3-phosphoinositide-dependent protein kinase 1 O15530 PDPK1_HUMAN Homo sapiens 3 0.7371
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase O67060 ISPE_AQUAE Aquifex aeolicus 3 0.7366
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.7346
Protease O38896 O38896_9HIV1 Human immunodeficiency virus 1 3 0.7336
3-hydroxy-3-methylglutaryl-coenzyme A reductase P04035 HMDH_HUMAN Homo sapiens 3 0.7334
Bromodomain-containing protein 9 Q9H8M2 BRD9_HUMAN Homo sapiens 3 0.7323
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.7309
Pantothenate synthetase P9WIL5 PANC_MYCTU Mycobacterium tuberculosis 3 0.7279
Proto-oncogene tyrosine-protein kinase receptor Ret P07949 RET_HUMAN Homo sapiens 3 0.7276
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.7274
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7266
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.7266
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7252
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.7248
Cyclin-dependent kinase 9 P50750 CDK9_HUMAN Homo sapiens 3 0.7241
Urokinase-type plasminogen activator P00749 UROK_HUMAN Homo sapiens 2 0.7239
mRNA-capping enzyme subunit alpha P78587 MCE1_CANAX Candida albicans 3 0.7230
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7226
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7220
Focal adhesion kinase 1 Q00944 FAK1_CHICK Gallus gallus 4 0.7212
Soluble cytochrome b562 P0ABE7 C562_ECOLX Escherichia coli 3 0.7198
cGMP-specific 3',5'-cyclic phosphodiesterase O76074 PDE5A_HUMAN Homo sapiens 4 0.7196
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 2 0.7195
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7194
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 Q9Y3Q4 HCN4_HUMAN Homo sapiens 3 0.7186
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7183
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Q4WP27 Q4WP27_ASPFU Aspergillus fumigatus 3 0.7178
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 3 0.7174
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7169
Aminoglycoside N(3)-acetyltransferase A0A3P1UCA6 Q81P86_BACAN Bacillus anthracis 3 0.7160
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7159
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.7148
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 4 0.7147
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 3 0.7144
dTDP-4-dehydrorhamnose 3,5-epimerase A0A6L7H6N0 A0A1S0QLH9_BACAN Bacillus anthracis 3 0.7134
Aurora kinase A O14965 AURKA_HUMAN Homo sapiens 3 0.7124
4,4'-diapophytoene synthase A9JQL9 CRTM_STAAU Staphylococcus aureus 3 0.7120
Methyltransferase D0VX01 D0VX01_WSLV Wesselsbron virus 4 0.7113
Probable enoyl-CoA hydratase EchA8 P9WNN9 ECHA8_MYCTU Mycobacterium tuberculosis 4 0.7110
Aldo-keto reductase family 1 member B1 P80276 ALDR_PIG Sus scrofa 3 0.7102
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7102
L-lactate dehydrogenase A chain P00338 LDHA_HUMAN Homo sapiens 4 0.7101
Type II methyltransferase M.TaqI P14385 MTTA_THEAQ Thermus aquaticus 3 0.7097
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7093
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7084
Thymidine phosphorylase Q7CP66 TYPH_SALTY Salmonella typhimurium 3 0.7083
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 4 0.7081
Polymerase acidic protein P03433 PA_I34A1 Influenza A virus 2 0.7074
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 2 0.7072
Nitric oxide synthase 3 P29474 NOS3_HUMAN Homo sapiens 3 0.7069
Uncharacterized protein Q55S71 Q55S71_CRYNB Cryptococcus neoformans var. neoformans serotype D 4 0.7058
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7049
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7044
FMN-dependent NAD(P)H:quinone oxidoreductase 1 Q9I5F3 AZOR1_PSEAE Pseudomonas aeruginosa 2 0.7038
Nickel-binding periplasmic protein P33590 NIKA_ECOLI Escherichia coli 3 0.7038
UDP-galactopyranose mutase Q48485 GLF1_KLEPN Klebsiella pneumoniae 3 0.7031
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha P49354 FNTA_HUMAN Homo sapiens 3 0.7029
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 3 0.7010
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7008

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