2,5-dihydroxy-6-methyl-3-(tridecyl)-1,4-benzoquinone - Compound Card

2,5-dihydroxy-6-methyl-3-(tridecyl)-1,4-benzoquinone

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2,5-dihydroxy-6-methyl-3-(tridecyl)-1,4-benzoquinone

Structure
Zoomed Structure
  • Family: Plantae - Primulaceae
  • Kingdom: Plantae
  • Class: Benzoquinone
    • Subclass: Alkenyl Benzoquinone
Canonical Smiles CCCCCCCCCCCCCC1=C(O)C(=O)C(=C(C1=O)O)C
InChI InChI=1S/C20H32O4/c1-3-4-5-6-7-8-9-10-11-12-13-14-16-19(23)17(21)15(2)18(22)20(16)24/h21,24H,3-14H2,1-2H3
InChIKey WKBFLXANWBWRIE-UHFFFAOYSA-N
Formula C20H32O4
HBA 4
HBD 2
MW 336.47
Rotatable Bonds 12
TPSA 74.6
LogP 5.48
Number Rings 1
Number Aromatic Rings 0
Heavy Atom Count 24
Formal Charge 0
Fraction CSP3 0.7
Exact Mass 336.23
Number of Lipinski Rule Violations 1
# Species Family Kingdom NCBI Taxonomy ID
1 Maesa lanceolata Primulaceae Plantae 992730

Showing of synonyms

  • Seumo AS, Nanfack ARD, et al. (2022). Alkenylbenzoquinones and other compounds from the fruit of Maesa lanceolata exhibited potent cytotoxic, antibacterial, and antiradical scavenging activities.. Natural product research,2022, 36(17), 4379-4387. [View] [PubMed]
Pubchem: 162871593
Nmrshiftdb2: 70035120

No compound-protein relationship available.

Structure

SMILES: O=C1C=CC(=O)C=C1

Level: 0

Mol. Weight: 336.47 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.94
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.42
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-3.23

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
1.63
Plasma Protein Binding
39.26
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
4.85
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.24
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
1.74
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
5.51
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
6.73
Rat (Acute)
1.85
Rat (Chronic Oral)
2.74
Fathead Minnow
4.04
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
391.58
Hydration Free Energy
-8.88
Log(D) at pH=7.4
3.9
Log(P)
6.47
Log S
-4.56
Log(Vapor Pressure)
-8.17
Melting Point
97.69
pKa Acid
4.47
pKa Basic
4.24
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Trichothecene 15-O-acetyltransferase TRI3 Q9C1B7 TRI3_FUSSP Fusarium sporotrichioides 3 0.9594
Peridinin-chlorophyll a protein, high-salt form O76183 O76183_AMPCA Amphidinium carterae 3 0.8480
thiamine diphosphokinase Q82ZE3 Q82ZE3_ENTFA Enterococcus faecalis 3 0.8466
Chorismate mutase AroH P19080 AROH_BACSU Bacillus subtilis 3 0.8335
Reaction center protein L chain P0C0Y7 RCEH_RHOSH Rhodobacter sphaeroides 3 0.8082
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.8023
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.7962
Sodium-dependent dopamine transporter Q7K4Y6 DAT_DROME Drosophila melanogaster 2 0.7374
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 2 0.7185
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7184
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase P19992 HSD_STREX Streptomyces exfoliatus 3 0.7181
ADP-ribosylation factor 1 P84077 ARF1_HUMAN Homo sapiens 2 0.7129
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7083
Glutamate receptor 4 P19493 GRIA4_RAT Rattus norvegicus 2 0.7036
Phosphotriesterase Q5KZU5 Q5KZU5_GEOKA Geobacillus kaustophilus 2 0.7023
TamL D3Y1I2 D3Y1I2_9ACTN Streptomyces sp. 307-9 2 0.7015
Glutamate receptor 2 P19491 GRIA2_RAT Rattus norvegicus 2 0.7010

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