5-hydroxynoracronycine - Compound Card

5-hydroxynoracronycine

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5-hydroxynoracronycine

Structure
Zoomed Structure
  • Family: Plantae - Rutaceae
  • Kingdom: Plantae
  • Class: Alkaloid
    • Subclass: Acridone Alkaloid
Canonical Smiles Oc1cc2OC(C)(C)C=Cc2c2c1c(=O)c1c(n2C)c(O)ccc1
InChI InChI=1S/C19H17NO4/c1-19(2)8-7-10-14(24-19)9-13(22)15-17(10)20(3)16-11(18(15)23)5-4-6-12(16)21/h4-9,21-22H,1-3H3
InChIKey JZQDCDLYNFZBIG-UHFFFAOYSA-N
Formula C19H17NO4
HBA 5
HBD 2
MW 323.35
Rotatable Bonds 0
TPSA 71.69
LogP 3.29
Number Rings 4
Number Aromatic Rings 3
Heavy Atom Count 24
Formal Charge 0
Fraction CSP3 0.21
Exact Mass 323.12
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Citrus aurantium Rutaceae Plantae 43166
2 Citrus clementina Rutaceae Plantae 85681
3 Citrus reticulata Rutaceae Plantae 85571

Showing of synonyms

  • Bissim S, Kenmogne S, et al. (2019). Bioactive acridone alkaloids and their derivatives from Citrus aurantium (Rutaceae). Phytochemistry Letters, 2019, 29, 148-153. [View]
  • Fomani M, Ngeufa Happi E, et al. (2016). Oxidative burst inhibition, cytotoxicity and antibacterial acriquinoline alkaloids from Citrus reticulate (Blanco).. Bioorganic & medicinal chemistry letters,2016, 26(2), 306-309. [View] [PubMed]
  • Bissim S, Kenmogne S, et al. (2021). The chemistry and biological activities of Citrus clementina Hort. Ex Tanaka (Rutaceae), a vegetatively propagated species.. Natural product research,2021, 35(22), 4839-4842. [View] [PubMed]
Pubchem: 5378702
Chebi: 69044
Nmrshiftdb2: 70003119
Metabolights: MTBLC69044
Bindingdb: 50336483

No compound-protein relationship available.

Structure

SMILES: C1=CCOc(cc2)c1c(c23)[nH]c4c(c3=O)cccc4

Level: 0

Mol. Weight: 323.35 g/mol

Anti-diabetic
Anti-inflammatory
Antioxidant

Absorption

Caco-2 (logPapp)
-4.71
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.660
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-1.21

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.170
Plasma Protein Binding
53.91
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
2.450
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.280
Biodegradation
Safe
Carcinogenesis
Toxic
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.270
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.130
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
3.670
Rat (Acute)
2.370
Rat (Chronic Oral)
2.290
Fathead Minnow
4.800
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
458.270
Hydration Free Energy
-11.310
Log(D) at pH=7.4
2.900
Log(P)
3.52
Log S
-4.85
Log(Vapor Pressure)
-8.52
Melting Point
268.41
pKa Acid
7.55
pKa Basic
7.11
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Fibroblast growth factor receptor 1 P11362 FGFR1_HUMAN Homo sapiens 3 0.8835
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 3 0.8692
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8197
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 3 0.8131
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 3 0.8117
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.7860
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7853
Alpha-ketoglutarate-dependent dioxygenase FTO Q9C0B1 FTO_HUMAN Homo sapiens 3 0.7804
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.7650
Serine/threonine-protein kinase SKY1 Q03656 SKY1_YEAST Saccharomyces cerevisiae 3 0.7460
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 4 0.7402
GCN5-related N-acetyltransferase B1YEL6 B1YEL6_EXIS2 Exiguobacterium sibiricum 3 0.7297
Lactoperoxidase P80025 PERL_BOVIN Bos taurus 3 0.7290
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 3 0.7186
Phosphodiesterase Q53I60 Q53I60_TRYCR Trypanosoma cruzi 4 0.7158
Streptogramin A acetyltransferase P50870 VATD_ENTFC Enterococcus faecium 3 0.7115
Lethal(3)malignant brain tumor-like protein 1 Q9Y468 LMBL1_HUMAN Homo sapiens 3 0.7106
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7100
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7096
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.7093
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7068
Ephrin type-B receptor 2 P54763 EPHB2_MOUSE Mus musculus 3 0.7065
Diphtheria toxin P00588 DTX_CORBE Corynephage beta 3 0.7055
Glutamate racemase Q9ZLT0 MURI_HELPJ Helicobacter pylori 3 0.7013

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