Gamboukokoenside B - Compound Card

Gamboukokoenside B

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Gamboukokoenside B

Structure
Zoomed Structure
  • Family: Plantae - Sapotaceae
  • Kingdom: Plantae
  • Class: Saponin
Canonical Smiles OC[C@]12CC[C@@]3(C(=CC[C@H]4[C@@]3(C)C[C@@H](O)[C@@H]3[C@]4(C)CCC(=O)[C@@]3(C)C(=O)O[C@@H]3OC[C@@H]([C@H]([C@H]3O)O)O)[C@@H]2CC(CC1)(C)C)C
InChI InChI=1S/C35H54O9/c1-30(2)11-13-35(18-36)14-12-32(4)19(20(35)15-30)7-8-23-31(3)10-9-24(39)34(6,27(31)21(37)16-33(23,32)5)29(42)44-28-26(41)25(40)22(38)17-43-28/h7,20-23,25-28,36-38,40-41H,8-18H2,1-6H3/t20-,21+,22-,23+,25+,26+,27+,28-,31+,32+,33+,34+,35+/m0/s1
InChIKey OZJBGTJJVJYLTA-RJSQLBBMSA-N
Formula C35H54O9
HBA 9
HBD 5
MW 618.81
Rotatable Bonds 3
TPSA 153.75
LogP 3.28
Number Rings 6
Number Aromatic Rings 0
Heavy Atom Count 44
Formal Charge 0
Fraction CSP3 0.89
Exact Mass 618.38
Number of Lipinski Rule Violations 1
# Species Family Kingdom NCBI Taxonomy ID
1 Gambeya boukokoensis Sapotaceae Plantae 1671035

Showing of synonyms

  • Wandji J, Tillequin F, et al. (2003). Pentacyclic triterpenoid and saponins from Gambeya boukokoensis.. Phytochemistry,2003, 64(4), 845-849. [View] [PubMed]
Pubchem: 12085799
Nmrshiftdb2: 70002817

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1OC(=O)C(C(=O)CC2)C(CC3)C2C(CC4)C3C(C=45)CCC6C5CCCC6

Level: 1

Mol. Weight: 618.81 g/mol

Structure

SMILES: C1CCCC2C1CCC(C2=3)C4C(CC3)C5C(CC4)CC(=O)CC5

Level: 0

Mol. Weight: 618.81 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 618.81 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.58
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.87
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
7.76

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.84
Plasma Protein Binding
97.07
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
0.9
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-3.34
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.24
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
5.89
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Toxic
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-16978.73
Rat (Acute)
3.92
Rat (Chronic Oral)
3.11
Fathead Minnow
36.65
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
409.01
Hydration Free Energy
-2.93
Log(D) at pH=7.4
4.14
Log(P)
2.81
Log S
-3.92
Log(Vapor Pressure)
-13.68
Melting Point
246.17
pKa Acid
6.21
pKa Basic
5.97
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.8488
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.7594
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 4 0.7210
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 3 0.7100

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