1-methoxycanthin-6-one - Compound Card

1-methoxycanthin-6-one

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1-methoxycanthin-6-one

Structure
Zoomed Structure
  • Family: Plantae - Simaroubaceae
  • Kingdom: Plantae
  • Class: Alkaloid
    • Subclass: Canthinone Alkaloid
Canonical Smiles COc1cnc2c3c1c1ccccc1n3c(=O)cc2
InChI InChI=1S/C15H10N2O2/c1-19-12-8-16-10-6-7-13(18)17-11-5-3-2-4-9(11)14(12)15(10)17/h2-8H,1H3
InChIKey LEPXKGXTXIACRO-UHFFFAOYSA-N
Formula C15H10N2O2
HBA 4
HBD 0
MW 250.26
Rotatable Bonds 1
TPSA 43.6
LogP 2.45
Number Rings 4
Number Aromatic Rings 4
Heavy Atom Count 19
Formal Charge 0
Fraction CSP3 0.07
Exact Mass 250.07
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Brucea antidysenterica Simaroubaceae Plantae 459111
2 Brucea antidysenterica Simaroubaceae Plantae 459111
3 Quassia amara Simaroubaceae Plantae 43725

Showing of synonyms

  • Njar VC, Alao TO, et al. (1993). 2-Methoxycanthin-6-one: A new alkaloid from the stem wood of Quassia amara. Planta Medica, 1993,59(3), 259-261. [View]
  • Makong YS, Fotso GW, et al. (2021). Bruceadysentoside A, a new pregnane glycoside and others secondary metabolites with cytotoxic activity from brucea antidysenterica J. F. Mill. (simaroubaceae).. Natural product research,2021, 35(12), 2037-2043. [View] [PubMed]
  • Makong YS, Mouthé Happi G, et al. (2019). Cytotoxic Stilbenes and Canthinone Alkaloids from Brucea antidysenterica (Simaroubaceae). Molecules, 2019, 24(23), 4412. [View] [PubMed]
Pubchem: 483522
Chebi: 66700
Nmrshiftdb2: 60078835
Metabolights: MTBLC66700

No compound-protein relationship available.

Structure

SMILES: c1cccc(c1c23)n4c2c(ccc4=O)ncc3

Level: 0

Mol. Weight: 250.26 g/mol

Cytotoxic

Absorption

Caco-2 (logPapp)
-4.56
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.020
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-1.24

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
1.450
Plasma Protein Binding
78.69
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
1.170
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
1.080
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
0.510
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.160
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Toxic
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Toxic
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
3.540
Rat (Acute)
2.220
Rat (Chronic Oral)
1.550
Fathead Minnow
4.920
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Toxic

General Properties

Boiling Point
449.490
Hydration Free Energy
-11.760
Log(D) at pH=7.4
2.060
Log(P)
2.44
Log S
-4.98
Log(Vapor Pressure)
-6.68
Melting Point
236.57
pKa Acid
9.72
pKa Basic
4.46
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.9723
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.9575
cGMP-dependent 3',5'-cyclic phosphodiesterase O00408 PDE2A_HUMAN Homo sapiens 3 0.9323
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.9310
Gag-Pol polyprotein P04585 POL_HV1H2 Human immunodeficiency virus type 1 group M subtype B 3 0.9278
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.8999
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8879
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.8789
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8783
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 3 0.8730
Pteridine reductase, putative Q581W1 Q581W1_TRYB2 Trypanosoma brucei brucei 3 0.8704
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8692
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.8653
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 3 0.8646
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.8558
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 3 0.8557
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8544
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 3 0.8526
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.8463
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 3 0.8439
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.8426
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8391
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8368
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 3 0.8360
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.8347
Acidic mammalian chitinase Q9BZP6 CHIA_HUMAN Homo sapiens 3 0.8340
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8274
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8223
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8187
Fatty acid-binding protein, intestinal P12104 FABPI_HUMAN Homo sapiens 3 0.8118
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.8092
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.8067
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8007
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7991
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase F6MZ55 F6MZ55_9FIRM Sporomusa ovata 3 0.7978
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7952
D(3) dopamine receptor P35462 DRD3_HUMAN Homo sapiens 3 0.7933
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 2 0.7925
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 2 0.7872
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.7846
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7840
Hematopoietic prostaglandin D synthase O60760 HPGDS_HUMAN Homo sapiens 3 0.7786
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7768
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7764
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7709
Stromelysin-1 P08254 MMP3_HUMAN Homo sapiens 3 0.7695
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 3 0.7647
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.7632
Cathepsin S P25774 CATS_HUMAN Homo sapiens 2 0.7571
Enoyl-ACP reductase Q9BJJ9 Q9BJJ9_PLAFA Plasmodium falciparum 3 0.7568
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 2 0.7528
3-phosphoinositide-dependent protein kinase 1 O15530 PDPK1_HUMAN Homo sapiens 3 0.7518
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 2 0.7517
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7514
2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase Q84HC8 NCSB1_STRCZ Streptomyces carzinostaticus 2 0.7514
Protein ppBat Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron VPI-5482 3 0.7500
Aurora kinase A O14965 AURKA_HUMAN Homo sapiens 3 0.7491
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7490
NAD(P)H dehydrogenase [quinone] 1 P15559 NQO1_HUMAN Homo sapiens 3 0.7481
Prenyltransferase Q4R2T2 Q4R2T2_STRC1 Streptomyces sp 2 0.7481
Soluble cytochrome b562 P0ABE7 C562_ECOLX Escherichia coli 3 0.7479
Serine/threonine-protein kinase Chk2 O96017 CHK2_HUMAN Homo sapiens 3 0.7454
Biphenyl-2,3-diol 1,2-dioxygenase P17297 BPHC_PSES1 Pseudomonas sp 3 0.7446
NAD(P)H-hydrate epimerase Q8K4Z3 NNRE_MOUSE Mus musculus 3 0.7439
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7431
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7429
Enoyl-ACP reductase Q9BH77 Q9BH77_PLAFA Plasmodium falciparum 3 0.7416
Fatty acid-binding protein, adipocyte P15090 FABP4_HUMAN Homo sapiens 2 0.7405
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial P08559 ODPA_HUMAN Homo sapiens 3 0.7392
Thymidine kinase P0DTH5 KITH_HHV11 Human herpesvirus 1 2 0.7390
Tetracycline repressor protein class H P51561 TETR8_PASMD Pasteurella multocida 2 0.7382
Glutamate receptor 2 P19491 GRIA2_RAT Rattus norvegicus 3 0.7374
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 2 0.7350
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.7346
Nucleoprotein P33469 NCAP_CVHOC Human coronavirus OC43 3 0.7345
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 2 0.7344
Dipeptidyl peptidase 4 P27487 DPP4_HUMAN Homo sapiens 3 0.7329
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 3 0.7324
Cathepsin S P25774 CATS_HUMAN Homo sapiens 2 0.7313
Glutamate receptor 3 P19492 GRIA3_RAT Rattus norvegicus 3 0.7301
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7288
Chloramphenicol acetyltransferase P62577 CAT_ECOLX Escherichia coli 2 0.7261
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 2 0.7245
Ceramide transfer protein Q9Y5P4 CERT_HUMAN Homo sapiens 3 0.7245
Glycogen phosphorylase, muscle form P00489 PYGM_RABIT Oryctolagus cuniculus 3 0.7243
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7228
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7225
LIM domain kinase 1 P53667 LIMK1_HUMAN Homo sapiens 2 0.7201
AGAP003309-PA A0A1U7F4W2 A0A1U7F4W2_ANOGA Anopheles gambiae 3 0.7194
Ephrin type-B receptor 2 P54763 EPHB2_MOUSE Mus musculus 2 0.7187
Glycoside Hydrolase Family 13 Q65MI2 Q65MI2_BACLD Bacillus licheniformis 2 0.7169
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 2 0.7161
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7160
Gag-Pol polyprotein P04585 POL_HV1H2 Human immunodeficiency virus type 1 group M subtype B 3 0.7152
High affinity 3',5'-cyclic-AMP phosphodiesterase 7A Q13946 PDE7A_HUMAN Homo sapiens 3 0.7135
Alpha-1-acid glycoprotein 2 P19652 A1AG2_HUMAN Homo sapiens 3 0.7131
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 4 0.7128
Cytidine and deoxycytidylate deaminase zinc-binding region Q82Y41 Q82Y41_NITEU Nitrosomonas europaea 3 0.7116
cGMP-inhibited 3',5'-cyclic phosphodiesterase 3B Q13370 PDE3B_HUMAN Homo sapiens 3 0.7110
Thymidine kinase P0DTH5 KITH_HHV11 Human herpesvirus 1 2 0.7109
Fructose-1,6-bisphosphatase 1 P09467 F16P1_HUMAN Homo sapiens 3 0.7089
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 2 0.7071
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.7059
Angiotensin-converting enzyme 2 Q9BYF1 ACE2_HUMAN Homo sapiens 2 0.7047
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7038
Putative HMP/thiamine-binding protein YkoF O34911 YKOF_BACSU Bacillus subtilis 3 0.7038
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7029

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