Justisecundoside A - Compound Card

Justisecundoside A

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Justisecundoside A

Structure
Zoomed Structure
  • Family: Plantae - Acanthaceae
  • Kingdom: Plantae
  • Class: Lignan
    • Subclass: Lignan Glycoside
Canonical Smiles OCC1OC(OC[C@H]2[C@H](OC(=O)/C/2=C\c2ccc3c(c2)OCO3)c2ccc3c(c2)OCO3)C(C(C1O)O)O
InChI InChI=1S/C26H26O12/c27-8-20-21(28)22(29)23(30)26(37-20)32-9-15-14(5-12-1-3-16-18(6-12)35-10-33-16)25(31)38-24(15)13-2-4-17-19(7-13)36-11-34-17/h1-7,15,20-24,26-30H,8-11H2/b14-5-/t15-,20?,21?,22?,23?,24-,26?/m1/s1
InChIKey CYDRITHFTROMEJ-DNNJIYMVSA-N
Formula C26H26O12
HBA 12
HBD 4
MW 530.48
Rotatable Bonds 6
TPSA 162.6
LogP 0.26
Number Rings 6
Number Aromatic Rings 2
Heavy Atom Count 38
Formal Charge 0
Fraction CSP3 0.42
Exact Mass 530.14
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Justicia secunda Acanthaceae Plantae 4190

Showing of synonyms

  • Kamlo Kamso VF, Dongmo Melogmo YK, et al. (2023). New lignan glycosides from Justicia secunda Vahl (Acanthaceae) with antimicrobial and antiparasitic properties.. Heliyon,2023, 9(12), e22897. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O1COc(c12)ccc(c2)C=C3C(=O)OC(c(c4)ccc(c45)OCO5)C3COC6CCCCO6

Level: 3

Mol. Weight: 530.48 g/mol

Structure

SMILES: O1COc(c12)ccc(c2)C=C3C(=O)OC(C3)c(c4)ccc(c45)OCO5

Level: 2

Mol. Weight: 530.48 g/mol

Structure

SMILES: O1COc(c12)ccc(c2)C=C3C(=O)OCC3COC4CCCCO4

Level: 2

Mol. Weight: 530.48 g/mol

Structure

SMILES: O1COc(c12)ccc(c2)C(OC(=O)C3=C)C3COC4CCCCO4

Level: 2

Mol. Weight: 530.48 g/mol

Structure

SMILES: C=C1C(=O)OC(C1)c(c2)ccc(c23)OCO3

Level: 1

Mol. Weight: 530.48 g/mol

Structure

SMILES: C1COC(=O)C1=Cc(c2)ccc(c23)OCO3

Level: 1

Mol. Weight: 530.48 g/mol

Structure

SMILES: C=C1C(=O)OCC1COC2CCCCO2

Level: 1

Mol. Weight: 530.48 g/mol

Structure

SMILES: O1COc(c12)cccc2

Level: 0

Mol. Weight: 530.48 g/mol

Structure

SMILES: C=C1C(=O)OCC1

Level: 0

Mol. Weight: 530.48 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 530.48 g/mol

Antibacterial

Absorption

Caco-2 (logPapp)
-6.08
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.75
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
1.51

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.09
Plasma Protein Binding
71.37
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
6.74
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.16
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.42
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.98
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-4301.18
Rat (Acute)
2.62
Rat (Chronic Oral)
3.14
Fathead Minnow
13.58
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
449.36
Hydration Free Energy
-2.92
Log(D) at pH=7.4
1.33
Log(P)
0.94
Log S
-2.99
Log(Vapor Pressure)
-9.64
Melting Point
193.03
pKa Acid
5.88
pKa Basic
2.03
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.8503
Urokinase-type plasminogen activator P00749 UROK_HUMAN Homo sapiens 3 0.8431
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.8226
Pantothenate synthetase P9WIL5 PANC_MYCTU Mycobacterium tuberculosis 3 0.8148
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8061
Seminal ribonuclease P00669 RNS_BOVIN Bos taurus 3 0.7981
Urokinase-type plasminogen activator P00749 UROK_HUMAN Homo sapiens 3 0.7977
Protease O38896 O38896_9HIV1 Human immunodeficiency virus 1 3 0.7945
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.7832
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.7699
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7548
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 3 0.7540
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7495
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7459
Nickel-binding periplasmic protein P33590 NIKA_ECOLI Escherichia coli 2 0.7454
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7397
Norsolorinic acid synthase Q12053 AFLC_ASPPU Aspergillus parasiticus 3 0.7375
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7308
ALK tyrosine kinase receptor Q9UM73 ALK_HUMAN Homo sapiens 3 0.7280
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7272
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7257
Histone deacetylase-like amidohydrolase Q70I53 HDAH_ALCSD Alcaligenes sp.) 2 0.7251
Serine/threonine-protein kinase SKY1 Q03656 SKY1_YEAST Saccharomyces cerevisiae 2 0.7237
Laminarinase Q9WXN1 Q9WXN1_THEMA Thermotoga maritima 3 0.7211
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.7127
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 2 0.7116
Caffeoyl-CoA O-methyltransferase Q40313 CAMT_MEDSA Medicago sativa 3 0.7091
Beta-galactosidase P00722 BGAL_ECOLI Escherichia coli 4 0.7070
L-lactate dehydrogenase A chain P04642 LDHA_RAT Rattus norvegicus 2 0.7038
ADP compounds hydrolase NudE P45799 NUDE_ECOLI Escherichia coli 2 0.7036
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 2 0.7035
Elongation factor Tu 1 P0CE47 EFTU1_ECOLI Escherichia coli 3 0.7034

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