Justisecundoside B - Compound Card

Justisecundoside B

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Justisecundoside B

Structure
Zoomed Structure
  • Family: Plantae - Acanthaceae
  • Kingdom: Plantae
  • Class: Lignan
    • Subclass: Lignan Glycoside
Canonical Smiles OCC1OC(Oc2cc3OCOc3cc2/C=C/2\C(=O)OC[C@@H]2Cc2ccc3c(c2)OCO3)C(C(C1O)O)O
InChI InChI=1S/C26H26O12/c27-8-21-22(28)23(29)24(30)26(38-21)37-17-7-20-19(35-11-36-20)6-13(17)5-15-14(9-32-25(15)31)3-12-1-2-16-18(4-12)34-10-33-16/h1-2,4-7,14,21-24,26-30H,3,8-11H2/b15-5-/t14-,21?,22?,23?,24?,26?/m0/s1
InChIKey OGTSXVUOVBQEGV-WSOMMRLDSA-N
Formula C26H26O12
HBA 12
HBD 4
MW 530.48
Rotatable Bonds 6
TPSA 162.6
LogP 0.12
Number Rings 6
Number Aromatic Rings 2
Heavy Atom Count 38
Formal Charge 0
Fraction CSP3 0.42
Exact Mass 530.14
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Justicia secunda Acanthaceae Plantae 4190

Showing of synonyms

  • Kamlo Kamso VF, Dongmo Melogmo YK, et al. (2023). New lignan glycosides from Justicia secunda Vahl (Acanthaceae) with antimicrobial and antiparasitic properties.. Heliyon,2023, 9(12), e22897. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1Oc(cc(c23)OCO3)c(c2)C=C4C(=O)OCC4Cc(c5)ccc(c56)OCO6

Level: 3

Mol. Weight: 530.48 g/mol

Structure

SMILES: O1COc(c12)ccc(c2)C=C3C(=O)OCC3Cc(c4)ccc(c45)OCO5

Level: 2

Mol. Weight: 530.48 g/mol

Structure

SMILES: C1COC(=O)C1=Cc(c2)c(cc(c23)OCO3)OC4CCCCO4

Level: 2

Mol. Weight: 530.48 g/mol

Structure

SMILES: C=C1C(=O)OCC1Cc(c2)ccc(c23)OCO3

Level: 1

Mol. Weight: 530.48 g/mol

Structure

SMILES: O1COc(c12)ccc(c2)OC3CCCCO3

Level: 1

Mol. Weight: 530.48 g/mol

Structure

SMILES: C1COC(=O)C1=Cc(c2)ccc(c23)OCO3

Level: 1

Mol. Weight: 530.48 g/mol

Structure

SMILES: O1COc(c12)cccc2

Level: 0

Mol. Weight: 530.48 g/mol

Structure

SMILES: C=C1C(=O)OCC1

Level: 0

Mol. Weight: 530.48 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 530.48 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.17
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.81
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
1.06

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.35
Plasma Protein Binding
61.57
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
6.5
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.01
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.59
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.88
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-4145.99
Rat (Acute)
2.44
Rat (Chronic Oral)
3.29
Fathead Minnow
13.64
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
482.91
Hydration Free Energy
-2.92
Log(D) at pH=7.4
1.49
Log(P)
0.73
Log S
-3.12
Log(Vapor Pressure)
-9.93
Melting Point
195.23
pKa Acid
6.81
pKa Basic
2.82
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Pantothenate synthetase P9WIL5 PANC_MYCTU Mycobacterium tuberculosis 3 0.9533
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.9126
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.9074
Urokinase-type plasminogen activator P00749 UROK_HUMAN Homo sapiens 3 0.8991
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.8954
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.8824
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.8639
Carnitine O-palmitoyltransferase 2, mitochondrial P18886 CPT2_RAT Rattus norvegicus 3 0.8582
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.8508
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.8246
Tetracycline repressor protein class H P51561 TETR8_PASMD Pasteurella multocida 3 0.8226
Genome polyprotein P26663 POLG_HCVBK Hepatitis C virus genotype 1b 3 0.8099
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 3 0.8030
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7813
Alpha-ketoglutarate-dependent dioxygenase FTO Q9C0B1 FTO_HUMAN Homo sapiens 5 0.7808
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7801
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.7790
Beta-glucosidase 1A Q25BW5 BGL1A_PHACH Phanerodontia chrysosporium 3 0.7629
Disks large homolog 1 Q12959 DLG1_HUMAN Homo sapiens 3 0.7624
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 3 0.7585
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7554
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7520
Protease O38896 O38896_9HIV1 Human immunodeficiency virus 1 3 0.7497
Nickel-binding periplasmic protein P33590 NIKA_ECOLI Escherichia coli 2 0.7449
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 2 0.7448
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7447
Bifunctional protein GlmU P43889 GLMU_HAEIN Haemophilus influenzae 3 0.7440
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7426
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.7402
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7342
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7342
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 3 0.7311
NADPH dehydrogenase 1 Q02899 OYE1_SACPS Saccharomyces pastorianus 3 0.7309
Seminal ribonuclease P00669 RNS_BOVIN Bos taurus 4 0.7306
Serine/threonine-protein kinase SKY1 Q03656 SKY1_YEAST Saccharomyces cerevisiae 2 0.7289
Alpha-ketoglutarate-dependent dioxygenase FTO Q9C0B1 FTO_HUMAN Homo sapiens 2 0.7267
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 2 0.7259
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7256
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7255
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 2 0.7252
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7238
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 2 0.7206
14-3-3 protein gamma P61981 1433G_HUMAN Homo sapiens 3 0.7204
NAD(P)H-hydrate epimerase Q8K4Z3 NNRE_MOUSE Mus musculus 2 0.7201
Glutathione S-transferase Q8ILQ7 GST_PLAFA Plasmodium falciparum 3 0.7176
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 2 0.7169
Laminarinase Q9WXN1 Q9WXN1_THEMA Thermotoga maritima 3 0.7156
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 2 0.7150
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 2 0.7119
Elongation factor Tu 1 P0CE47 EFTU1_ECOLI Escherichia coli 3 0.7109
2-aminohexano-6-lactam racemase Q7M181 ACLR_ACHOB Achromobacter obae 2 0.7109
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 2 0.7107
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 2 0.7101
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 2 0.7096
Deacetoxycephalosporin C synthase P18548 CEFE_STRCL Streptomyces clavuligerus 2 0.7086
Flavoredoxin Q72HI0 Q72HI0_THET2 Thermus thermophilus 2 0.7071
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 2 0.7065
Urokinase-type plasminogen activator P00749 UROK_HUMAN Homo sapiens 2 0.7058
Tryptase alpha/beta-1 Q15661 TRYB1_HUMAN Homo sapiens 3 0.7042
UDP-N-acetylglucosamine 1-carboxyvinyltransferase P33038 MURA_ENTCC Enterobacter cloacae subsp. cloacae 2 0.7041
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 2 0.7026
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 3 0.7021
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 2 0.7020
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 2 0.7009

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