Justisecundoside C - Compound Card

Justisecundoside C

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Justisecundoside C

Structure
Zoomed Structure
  • Family: Plantae - Acanthaceae
  • Kingdom: Plantae
  • Class: Lignan
    • Subclass: Lignan Glycoside
Canonical Smiles OC[C@H]1O[C@@H](Oc2cc3OCOc3cc2/C=C\2/C(=O)OC[C@@H]2Cc2ccc3c(c2)OCO3)[C@H]([C@H]([C@@H]1O)O)O
InChI InChI=1S/C26H26O12/c27-8-21-22(28)23(29)24(30)26(38-21)37-17-7-20-19(35-11-36-20)6-13(17)5-15-14(9-32-25(15)31)3-12-1-2-16-18(4-12)34-10-33-16/h1-2,4-7,14,21-24,26-30H,3,8-11H2/b15-5+/t14-,21+,22+,23-,24-,26+/m0/s1
InChIKey OGTSXVUOVBQEGV-GCMRKEDYSA-N
Formula C26H26O12
HBA 12
HBD 4
MW 530.48
Rotatable Bonds 6
TPSA 162.6
LogP 0.12
Number Rings 6
Number Aromatic Rings 2
Heavy Atom Count 38
Formal Charge 0
Fraction CSP3 0.42
Exact Mass 530.14
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Justicia secunda Acanthaceae Plantae 4190

Showing of synonyms

  • Kamlo Kamso VF, Dongmo Melogmo YK, et al. (2023). New lignan glycosides from Justicia secunda Vahl (Acanthaceae) with antimicrobial and antiparasitic properties.. Heliyon,2023, 9(12), e22897. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1Oc(cc(c23)OCO3)c(c2)C=C4C(=O)OCC4Cc(c5)ccc(c56)OCO6

Level: 3

Mol. Weight: 530.48 g/mol

Structure

SMILES: O1COc(c12)ccc(c2)C=C3C(=O)OCC3Cc(c4)ccc(c45)OCO5

Level: 2

Mol. Weight: 530.48 g/mol

Structure

SMILES: C1COC(=O)C1=Cc(c2)c(cc(c23)OCO3)OC4CCCCO4

Level: 2

Mol. Weight: 530.48 g/mol

Structure

SMILES: C=C1C(=O)OCC1Cc(c2)ccc(c23)OCO3

Level: 1

Mol. Weight: 530.48 g/mol

Structure

SMILES: O1COc(c12)ccc(c2)OC3CCCCO3

Level: 1

Mol. Weight: 530.48 g/mol

Structure

SMILES: C1COC(=O)C1=Cc(c2)ccc(c23)OCO3

Level: 1

Mol. Weight: 530.48 g/mol

Structure

SMILES: O1COc(c12)cccc2

Level: 0

Mol. Weight: 530.48 g/mol

Structure

SMILES: C=C1C(=O)OCC1

Level: 0

Mol. Weight: 530.48 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 530.48 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.17
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.810
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
1.09

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
1.350
Plasma Protein Binding
94.12
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
6.520
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.220
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.590
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.870
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-4149.010
Rat (Acute)
2.460
Rat (Chronic Oral)
3.280
Fathead Minnow
13.810
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Toxic
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
489.190
Hydration Free Energy
-2.920
Log(D) at pH=7.4
1.670
Log(P)
0.55
Log S
-3.22
Log(Vapor Pressure)
-10.51
Melting Point
201.49
pKa Acid
6.72
pKa Basic
2.95
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Stromelysin-1 P08254 MMP3_HUMAN Homo sapiens 3 0.9022
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.8967
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.8826
Pantothenate synthetase P9WIL5 PANC_MYCTU Mycobacterium tuberculosis 3 0.8731
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8474
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8465
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8389
Rhodopsin kinase GRK1 P28327 GRK1_BOVIN Bos taurus 3 0.8230
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8200
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 3 0.8128
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.8101
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8041
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8025
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 3 0.7980
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7964
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7863
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.7853
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 3 0.7808
Beta-glucuronidase P05804 BGLR_ECOLI Escherichia coli 3 0.7785
Glycogen synthase Q9V2J8 Q9V2J8_PYRAB Pyrococcus abyssi 3 0.7772
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 3 0.7711
Catechol O-methyltransferase P22734 COMT_RAT Rattus norvegicus 3 0.7708
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7686
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 3 0.7682
Chitinase Q54276 Q54276_SERMA Serratia marcescens 2 0.7675
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7567
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7545
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7543
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 3 0.7458
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 2 0.7446
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.7415
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7392
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.7386
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 2 0.7379
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7369
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7313
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7288
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.7279
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7272
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7261
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7247
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 4 0.7236
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 2 0.7159
Glucose-1-phosphate thymidylyltransferase Q9HU22 Q9HU22_PSEAE Pseudomonas aeruginosa 3 0.7141
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7133
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 2 0.7103
Cysteine synthase P45040 CYSK_HAEIN Haemophilus influenzae 3 0.7098
Histone deacetylase 4 P56524 HDAC4_HUMAN Homo sapiens 2 0.7094
Capsid protein VP1 O56137 O56137_9VIRU Adeno-associated virus - 6 3 0.7055
tyrosine--tRNA ligase Q4QFJ7 Q4QFJ7_LEIMA Leishmania major 3 0.7040
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 3 0.7033
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 2 0.7032
Cyclic dipeptide N-prenyltransferase D1D8L6 D1D8L6_ASPFM Neosartorya fumigata 2 0.7021
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 2 0.7020
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 2 0.7017
DNA-directed DNA polymerase Q38087 DPOL_BPR69 Escherichia phage RB69 3 0.7015
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 3 0.7011

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