(Z)-sphaerodiol - Compound Card

(Z)-sphaerodiol

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(Z)-sphaerodiol

Structure
Zoomed Structure
  • Family: Plantae - Annonaceae
  • Kingdom: Plantae
  • Class: Isoprenoid
    • Subclass: Meroisoprenoid
Canonical Smiles O[C@@H](/C=C/1\OC(=O)C=C1)CO
InChI InChI=1S/C7H8O4/c8-4-5(9)3-6-1-2-7(10)11-6/h1-3,5,8-9H,4H2/b6-3-/t5-/m0/s1
InChIKey VSAQBDLOFJVSCF-LPHWOVDOSA-N
Formula C7H8O4
HBA 4
HBD 2
MW 156.14
Rotatable Bonds 2
TPSA 66.76
LogP -0.66
Number Rings 1
Number Aromatic Rings 0
Heavy Atom Count 11
Formal Charge 0
Fraction CSP3 0.29
Exact Mass 156.04
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Sphaerocoryne gracilis Annonaceae Plantae 489348

Showing of synonyms

  • Maeda G, Munissi JJE, et al. (2020). A Meroisoprenoid, Heptenolides, and C‐Benzylated Flavonoids from Sphaerocoryne gracilis ssp. Gracilis. Journal of natural products,2020, 83(2), 316-322. [View] [PubMed]
CPRiL: 100856
Structure

SMILES: C=C1C=CC(=O)O1

Level: 0

Mol. Weight: 156.14 g/mol

Anti-plasmodial

Absorption

Caco-2 (logPapp)
-4.97
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-3.86
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-3.14

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.52
Plasma Protein Binding
11.41
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
3.18
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-0.51
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
1.14
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
3.34
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-2.14
Rat (Acute)
2.17
Rat (Chronic Oral)
2.17
Fathead Minnow
3.66
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
320.97
Hydration Free Energy
-12.07
Log(D) at pH=7.4
-0.65
Log(P)
-1.15
Log S
-0.22
Log(Vapor Pressure)
-6.26
Melting Point
91.41
pKa Acid
6.08
pKa Basic
4.62
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Glycogenin-1 P46976 GLYG_HUMAN Homo sapiens 3 0.8884
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8479
Lysozyme C II P11941 LYSC2_ONCMY Oncorhynchus mykiss 3 0.8428
Glycogen synthase P0A6U8 GLGA_ECOLI Escherichia coli 3 0.8141
Ascorbate-specific PTS system EIIC component P39301 ULAA_ECOLI Escherichia coli 3 0.7858
Iota toxin component Ia Q46220 Q46220_CLOPF Clostridium perfringens 3 0.7088

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