Pandensenol A - Compound Card

Pandensenol A

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Pandensenol A

Structure
Zoomed Structure
  • Family: Plantae - Annonaceae
  • Kingdom: Plantae
  • Class: Cycloalkene
    • Subclass: Seco-Cyclohexene Derivative
Canonical Smiles OC[C@@]1(OC(=O)c2ccccc2)[C@H](O)C=C[C@H]([C@@H]1O)O
InChI InChI=1S/C14H16O6/c15-8-14(11(17)7-6-10(16)12(14)18)20-13(19)9-4-2-1-3-5-9/h1-7,10-12,15-18H,8H2/t10-,11-,12+,14-/m1/s1
InChIKey RDQXYFZQGIFYRB-NRWUCQMLSA-N
Formula C14H16O6
HBA 6
HBD 4
MW 280.28
Rotatable Bonds 3
TPSA 107.22
LogP -0.77
Number Rings 2
Number Aromatic Rings 1
Heavy Atom Count 20
Formal Charge 0
Fraction CSP3 0.36
Exact Mass 280.09
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Uvaria pandensis Annonaceae Plantae 673193

Showing of synonyms

  • Maeda G, Gilissen PJ, et al. (2021). Oxygenated Cyclohexene Derivatives from the Stem and Root Barks of Uvaria pandensis. Journal of natural products,2021, 84(12), 3080-3089. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: c1ccccc1C(=O)OC2CC=CCC2

Level: 1

Mol. Weight: 280.28 g/mol

Structure

SMILES: C1=CCCCC1

Level: 0

Mol. Weight: 280.28 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 280.28 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.05
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.24
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-1.77

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.46
Plasma Protein Binding
58.78
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
3.74
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-1.33
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
1.22
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
3.39
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-2.09
Rat (Acute)
2.1
Rat (Chronic Oral)
3.18
Fathead Minnow
3.86
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
367.46
Hydration Free Energy
-14.63
Log(D) at pH=7.4
0.06
Log(P)
-0.8
Log S
-1.48
Log(Vapor Pressure)
-9.31
Melting Point
155.43
pKa Acid
5.13
pKa Basic
2.84
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Lactoperoxidase P80025 PERL_BOVIN Bos taurus 3 0.9456
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.8964
Methionine aminopeptidase 2 P9WK19 MAP12_MYCTU Mycobacterium tuberculosis 3 0.8380
Purine nucleoside phosphorylase DeoD-type O34925 DEOD_BACSU Bacillus subtilis 3 0.8137
Adenylate cyclase 2 A0A2U2H3Y1 A0A384LKY8_YERPE Yersinia pestis 3 0.8018
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.7841
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7838
Class B acid phosphatase Q540U1 APHA_SALTM Salmonella typhimurium 2 0.7807
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.7755
Prothrombin P00734 THRB_HUMAN Homo sapiens 4 0.7718
Purine nucleoside phosphorylase DeoD-type P0ABP9 DEOD_ECO57 Escherichia coli O157:H7 3 0.7696
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 3 0.7683
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 3 0.7643
Adenylate cyclase type 5 P30803 ADCY5_CANLF Canis lupus familiaris 3 0.7598
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.7562
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 3 0.7544
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7464
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 3 0.7443
Purine nucleoside phosphorylase DeoD-type Q5EEL8 DEOD_BACCE Bacillus cereus 3 0.7420
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7416
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 2 0.7364
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7325
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 2 0.7323
Metallophosphoesterase MPPED2 B1WBP0 MPPD2_RAT Rattus norvegicus 3 0.7310
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 3 0.7282
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 3 0.7281
Bifunctional dihydrofolate reductase-thymidylate synthase Q27793 DRTS_TRYCR Trypanosoma cruzi 3 0.7246
Acetyl-CoA carboxylase 2 O00763 ACACB_HUMAN Homo sapiens 3 0.7199
Flavoredoxin Q72HI0 Q72HI0_THET2 Thermus thermophilus 2 0.7163
Predicted acetyltransferase Q97ML2 Q97ML2_CLOAB Clostridium acetobutylicum 3 0.7161
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 2 0.7148
Adenylate cyclase type 5 P30803 ADCY5_CANLF Canis lupus familiaris 3 0.7112
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 3 0.7097
Gag-Pol polyprotein P05896 POL_SIVM1 Simian immunodeficiency virus 3 0.7092
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial Q33862 Q33862_ASCSU Ascaris suum 3 0.7080
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 2 0.7077
CCA-adding enzyme O28126 CCA_ARCFU Archaeoglobus fulgidus 2 0.7044
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 2 0.7028
Diamine acetyltransferase 1 P21673 SAT1_HUMAN Homo sapiens 2 0.7013
Coagulation factor X P00742 FA10_HUMAN Homo sapiens 2 0.7004
DNA-directed DNA polymerase Q38087 DPOL_BPR69 Escherichia phage RB69 3 0.7002

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