Pandensenol C - Compound Card

Pandensenol C

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Pandensenol C

Structure
Zoomed Structure
  • Family: Plantae - Annonaceae
  • Kingdom: Plantae
  • Class: Cycloalkene
    • Subclass: Seco-Cyclohexene Derivative
Canonical Smiles O=C(c1ccccc1)OCC1=CCCC[C@H]1C(O)(C)C
InChI InChI=1S/C17H22O3/c1-17(2,19)15-11-7-6-10-14(15)12-20-16(18)13-8-4-3-5-9-13/h3-5,8-10,15,19H,6-7,11-12H2,1-2H3/t15-/m1/s1
InChIKey XNUSKLRINMWJSU-OAHLLOKOSA-N
Formula C17H22O3
HBA 3
HBD 1
MW 274.36
Rotatable Bonds 4
TPSA 46.53
LogP 3.34
Number Rings 2
Number Aromatic Rings 1
Heavy Atom Count 20
Formal Charge 0
Fraction CSP3 0.47
Exact Mass 274.16
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Uvaria pandensis Annonaceae Plantae 673193

Showing of synonyms

  • Maeda G, Gilissen PJ, et al. (2021). Oxygenated Cyclohexene Derivatives from the Stem and Root Barks of Uvaria pandensis. Journal of natural products,2021, 84(12), 3080-3089. [View] [PubMed]
Pubchem: 171342641

No compound-protein relationship available.

Structure

SMILES: c1ccccc1C(=O)OCC2=CCCCC2

Level: 1

Mol. Weight: 274.36 g/mol

Structure

SMILES: C1=CCCCC1

Level: 0

Mol. Weight: 274.36 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 274.36 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.71
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.22
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.92

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.5
Plasma Protein Binding
58.77
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
5.32
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.06
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.0
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.5
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
1.77
Rat (Acute)
2.17
Rat (Chronic Oral)
2.12
Fathead Minnow
4.1
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
326.74
Hydration Free Energy
-7.04
Log(D) at pH=7.4
3.06
Log(P)
3.78
Log S
-3.96
Log(Vapor Pressure)
-5.27
Melting Point
67.35
pKa Acid
10.8
pKa Basic
5.77
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.9153
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial Q33862 Q33862_ASCSU Ascaris suum 3 0.9036
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.8997
Lactoperoxidase P80025 PERL_BOVIN Bos taurus 3 0.8820
Neocarzinostatin P0A3R9 NCZS_STRCZ Streptomyces carzinostaticus 3 0.8758
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 3 0.8732
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 4 0.8465
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8390
HTH-type transcriptional regulator EthR P9WMC1 ETHR_MYCTU Mycobacterium tuberculosis 3 0.8137
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 2 0.8110
Protein LlR18A P52778 L18A_LUPLU Lupinus luteus 3 0.8087
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.8073
Gastrotropin P51161 FABP6_HUMAN Homo sapiens 3 0.8071
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.8065
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.8037
Retinol dehydratase Q26490 Q26490_SPOFR Spodoptera frugiperda 3 0.8035
Retinoic acid receptor RXR-alpha P19793 RXRA_HUMAN Homo sapiens 3 0.8023
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7962
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 3 0.7942
ActVA 6 protein Q53908 Q53908_STRCH Streptomyces coelicolor 3 0.7937
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7876
Sulfide-quinone reductase B7JBP8 SQRD_ACIF2 Acidithiobacillus ferrooxidans) 2 0.7731
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7730
Lanosterol 14-alpha-demethylase Q385E8 Q385E8_TRYB2 Trypanosoma brucei brucei 3 0.7684
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 2 0.7670
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 2 0.7668
Tetracycline repressor protein class H P51561 TETR8_PASMD Pasteurella multocida 3 0.7651
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7627
Retinoic acid receptor RXR-alpha P19793 RXRA_HUMAN Homo sapiens 2 0.7605
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 2 0.7597
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7586
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7584
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 2 0.7565
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 2 0.7562
HTH-type transcriptional regulator EthR P9WMC1 ETHR_MYCTU Mycobacterium tuberculosis 3 0.7558
Retinoic acid receptor RXR Q8T5C6 RXR_BIOGL Biomphalaria glabrata 3 0.7555
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7545
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 2 0.7540
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7538
Succinate dehydrogenase flavoprotein subunit P0AC41 SDHA_ECOLI Escherichia coli 3 0.7495
Retinol-binding protein 1 P02696 RET1_RAT Rattus norvegicus 3 0.7428
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 2 0.7423
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.7423
Glutamate receptor 2 P19491 GRIA2_RAT Rattus norvegicus 3 0.7420
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7398
3-ketosteroid dehydrogenase Q9RA02 Q9RA02_RHOER Rhodococcus erythropolis 2 0.7396
Stromelysin-1 P08254 MMP3_HUMAN Homo sapiens 2 0.7394
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 2 0.7372
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7328
Soluble cytochrome b562 P0ABE7 C562_ECOLX Escherichia coli 2 0.7303
Scytalone dehydratase P56221 SCYD_MAGO7 Pyricularia oryzae 4 0.7279
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 2 0.7276
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7270
Nuclear receptor ROR-beta P45446 RORB_RAT Rattus norvegicus 2 0.7265
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7232
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7229
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 2 0.7216
Chitinase Q54276 Q54276_SERMA Serratia marcescens 3 0.7213
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7212
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase P19992 HSD_STREX Streptomyces exfoliatus 2 0.7197
L-lactate dehydrogenase A chain P04642 LDHA_RAT Rattus norvegicus 2 0.7190
Coagulation factor X P00742 FA10_HUMAN Homo sapiens 2 0.7181
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7180
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 2 0.7180
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 2 0.7175
Phenylpyruvate C(3)-methyltransferase Q643C8 MPPJ_STRHY Streptomyces hygroscopicus 2 0.7174
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 2 0.7169
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7168
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7168
Carbonic anhydrase 4 Q64444 CAH4_MOUSE Mus musculus 2 0.7167
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7163
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 2 0.7151
Flavoredoxin Q72HI0 Q72HI0_THET2 Thermus thermophilus 2 0.7150
Vitamin D3 receptor P13053 VDR_RAT Rattus norvegicus 3 0.7149
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7147
Rhodopsin P02699 OPSD_BOVIN Bos taurus 2 0.7141
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 2 0.7139
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 2 0.7136
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 2 0.7128
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7126
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7106
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7101
Abscisic acid receptor PYL9 Q84MC7 PYL9_ARATH Arabidopsis thaliana 3 0.7095
Retinoic acid receptor RXR-alpha P19793 RXRA_HUMAN Homo sapiens 3 0.7094
Retinol-binding protein 1 P09455 RET1_HUMAN Homo sapiens 3 0.7086
Cytochrome P450 S6BVH1 S6BVH1_RHOER Rhodococcus erythropolis 3 0.7085
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7075
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 2 0.7068
prolyl oligopeptidase Q9X6R4 Q9X6R4_AERCA Aeromonas caviae 2 0.7057
Acidic phospholipase A2 3 P60045 PA2A3_NAJSG Naja sagittifera 2 0.7048
Integrin alpha-L P20701 ITAL_HUMAN Homo sapiens 2 0.7047
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7028
Prothrombin P00734 THRB_HUMAN Homo sapiens 2 0.7009
Chalcone synthase 2 P30074 CHS2_MEDSA Medicago sativa 3 0.7005

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