Procyanidin dimer monogallate - Compound Card

Procyanidin dimer monogallate

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Procyanidin dimer monogallate

Structure
Zoomed Structure
  • Family: Plantae - Ximeniaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavanol
Canonical Smiles C1([C@H](C(c2c(cc(cc2O1)O)O)O)OC(=O)c1cc(O)c(O)c(O)c1)(O[C@@H]1C(Oc2c(C1)c(cc(c2)O)O)c1cc(c(cc1)O)O)c1cc(c(cc1)O)O
InChI InChI=1S/C37H30O17/c38-17-9-22(42)19-13-30(34(51-28(19)11-17)14-1-3-20(40)23(43)5-14)54-37(16-2-4-21(41)24(44)8-16)35(33(49)31-25(45)10-18(39)12-29(31)53-37)52-36(50)15-6-26(46)32(48)27(47)7-15/h1-12,30,33-35,38-49H,13H2/t30-,33?,34?,35-,37?/m0/s1
InChIKey GBVJWAHIWSSVKA-YQQOODEESA-N
Formula C37H30O17
HBA 17
HBD 12
MW 746.63
Rotatable Bonds 6
TPSA 296.75
LogP 3.71
Number Rings 7
Number Aromatic Rings 5
Heavy Atom Count 54
Formal Charge 0
Fraction CSP3 0.16
Exact Mass 746.15
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Ximenia americana Ximeniaceae Plantae 50174

Showing of synonyms

  • Sobeh M, Mahmoud MF, et al. (2017). Hepatoprotective and hypoglycemic effects of a tannin rich extract from Ximenia americana var. caffra root. Phytomedicine : international journal of phytotherapy and phytopharmacology,2017, 33(), 36-42. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: c1ccccc1C(=O)OC(C2)C(c3ccccc3)(Oc(c24)cccc4)OC(C5)C(c6ccccc6)Oc(c57)cccc7

Level: 4

Mol. Weight: 746.63 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(C2)C(c3ccccc3)(Oc(c24)cccc4)OC(C5)COc(c56)cccc6

Level: 3

Mol. Weight: 746.63 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(C2)C(Oc(c23)cccc3)OC(C4)C(c5ccccc5)Oc(c46)cccc6

Level: 3

Mol. Weight: 746.63 g/mol

Structure

SMILES: c1ccccc1C(CC2)(Oc(c23)cccc3)OC(C4)C(c5ccccc5)Oc(c46)cccc6

Level: 3

Mol. Weight: 746.63 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(C2)C(Oc(c23)cccc3)OC(C4)COc(c45)cccc5

Level: 2

Mol. Weight: 746.63 g/mol

Structure

SMILES: c1ccccc1C(CC2)(Oc(c23)cccc3)OC(C4)COc(c45)cccc5

Level: 2

Mol. Weight: 746.63 g/mol

Structure

SMILES: c1cccc(c12)OC(c3ccccc3)C(C2)OC(CC4)Oc(c45)cccc5

Level: 2

Mol. Weight: 746.63 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(C2)C(c3ccccc3)Oc(c24)cccc4

Level: 2

Mol. Weight: 746.63 g/mol

Structure

SMILES: c1cccc(c12)OCC(C2)OC(CC3)Oc(c34)cccc4

Level: 1

Mol. Weight: 746.63 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(C2)COc(c23)cccc3

Level: 1

Mol. Weight: 746.63 g/mol

Structure

SMILES: c1cccc(c12)OC(CC2)c3ccccc3

Level: 1

Mol. Weight: 746.63 g/mol

Structure

SMILES: C1CCOc(c12)cccc2

Level: 0

Mol. Weight: 746.63 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 746.63 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.35
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
7.96
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
1888.48

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.68
Plasma Protein Binding
46.74
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
10.96
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-41.17
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
1.19
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
6.34
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-3422946.15
Rat (Acute)
2.39
Rat (Chronic Oral)
4.67
Fathead Minnow
4330.79
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
376677.71
Hydration Free Energy
-2.92
Log(D) at pH=7.4
1.53
Log(P)
2.56
Log S
-6.08
Log(Vapor Pressure)
-12396.88
Melting Point
284.65
pKa Acid
-59.78
pKa Basic
4.29
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8351
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 4 0.8173
Glucose-1-phosphate thymidylyltransferase Q9HU22 Q9HU22_PSEAE Pseudomonas aeruginosa 4 0.8082
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8020
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 4 0.7933
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 4 0.7793
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7691
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.7638
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Q4WP27 Q4WP27_ASPFU Aspergillus fumigatus 3 0.7588
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.7418
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7415
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7299
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 4 0.7211
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7165
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7057
Small heat shock protein StHsp14.0 Q970D9 Q970D9_SULTO Sulfurisphaera tokodaii 3 0.7014

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