N-demethylgalanthamine - Compound Card

N-demethylgalanthamine

Select a section from the left sidebar

N-demethylgalanthamine

Structure
Zoomed Structure
  • Family: Plantae - Amaryllidaceae
  • Kingdom: Plantae
  • Class: Alkaloid
Canonical Smiles COc1ccc2c3c1O[C@@H]1[C@@]3(CCNC2)C=C[C@@H](C1)O
InChI InChI=1S/C16H19NO3/c1-19-12-3-2-10-9-17-7-6-16-5-4-11(18)8-13(16)20-15(12)14(10)16/h2-5,11,13,17-18H,6-9H2,1H3/t11-,13-,16-/m0/s1
InChIKey AIXQQSTVOSFSMO-RBOXIYTFSA-N
Formula C16H19NO3
HBA 4
HBD 2
MW 273.33
Rotatable Bonds 1
TPSA 50.72
LogP 1.51
Number Rings 4
Number Aromatic Rings 1
Heavy Atom Count 20
Formal Charge 0
Fraction CSP3 0.5
Exact Mass 273.14
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Crinum natans Amaryllidaceae Plantae 573721
2 Zephyranthes robusta Amaryllidaceae Plantae 1234388
3 Zephyranthes rosea Amaryllidaceae Plantae 146470

Showing of synonyms

  • Shawky E, El Sohafy S.M, et al. (2021). Profiling of acetylcholinesterase inhibitory alkaloids from some Crinum, Habranthus and Zephyranthes species by GC–MS combined with multivariate analyses and in silico studies.. Nat Prod Res, 2021, 35(5), 807-814.. [View] [PubMed]
Pubchem: 9838394
Kegg Ligand: C12173
Chebi: 31919
Nmrshiftdb2: 60069616
Chembl: CHEMBL1385
Bindingdb: 50166809
CPRiL: 125952
Structure

SMILES: C1=CCCC2Oc(c3C124)cccc3CNCC4

Level: 0

Mol. Weight: 273.33 g/mol

Ache-inhibitor

Absorption

Caco-2 (logPapp)
-5.05
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.740
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-3.1

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.490
Plasma Protein Binding
36.59
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
3.600
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.330
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.170
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
8.910
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-2.210
Rat (Acute)
3.070
Rat (Chronic Oral)
1.750
Fathead Minnow
4.030
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
350.760
Hydration Free Energy
-9.840
Log(D) at pH=7.4
0.720
Log(P)
0.69
Log S
-1.04
Log(Vapor Pressure)
-6.77
Melting Point
156.49
pKa Acid
10.53
pKa Basic
8.27
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 3 0.8480
Sulfotransferase 1A1 P50225 ST1A1_HUMAN Homo sapiens 3 0.8424
3',5'-cyclic-AMP phosphodiesterase 4A P27815 PDE4A_HUMAN Homo sapiens 4 0.8281
Prolyl tripeptidyl peptidase Q7MUW6 PTP_PORGI Porphyromonas gingivalis 3 0.8259
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 3 0.8216
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8196
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 3 0.8045
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 3 0.8007
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.7997
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase O67060 ISPE_AQUAE Aquifex aeolicus 3 0.7851
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.7809
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7801
Calmodulin-1 P0DP29 CALM1_RAT Rattus norvegicus 3 0.7637
Purine nucleoside phosphorylase P00491 PNPH_HUMAN Homo sapiens 3 0.7637
11-beta-hydroxysteroid dehydrogenase 1 P50172 DHI1_MOUSE Mus musculus 3 0.7623
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7614
Lethal(3)malignant brain tumor-like protein 1 Q9Y468 LMBL1_HUMAN Homo sapiens 3 0.7613
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7570
Purine nucleoside phosphorylase DeoD-type O34925 DEOD_BACSU Bacillus subtilis 3 0.7408
Serine/threonine-protein kinase Nek2 P51955 NEK2_HUMAN Homo sapiens 3 0.7390
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.7390
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.7361
Eukaryotic translation initiation factor 4E type 3 Q9DBB5 IF4E3_MOUSE Mus musculus 3 0.7205
Mitomycin biosynthesis 6-O-methyltransferase Q9X5T6 MMCR_STRLA Streptomyces lavendulae 3 0.7205
Lactoylglutathione lyase Q04760 LGUL_HUMAN Homo sapiens 2 0.7202
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 2 0.7194
Class 10 plant pathogenesis-related protein 2B Q9LLQ2 P102B_LUPLU Lupinus luteus 2 0.7194
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7178
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7148
Chloramphenicol 3-O phosphotransferase Q56148 CPT_STRVP Streptomyces venezuelae 3 0.7121
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.7088
Rhodopsin P02699 OPSD_BOVIN Bos taurus 2 0.7082
Cytochrome P450 monooxygenase PikC O87605 PIKC_STRVZ Streptomyces venezuelae 2 0.7077
Genome polyprotein Q2YHF0 POLG_DEN4T Dengue virus type 4 3 0.7020
Pteridine reductase 1 Q01782 PTR1_LEIMA Leishmania major 2 0.7018
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 3 0.7013
Purine nucleoside phosphorylase P00491 PNPH_HUMAN Homo sapiens 3 0.7011
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 2 0.7010
Biphenyl-2,3-diol 1,2-dioxygenase P17297 BPHC_PSES1 Pseudomonas sp 3 0.7007

Download SDF