Saikosaponine v-1 - Compound Card

Saikosaponine v-1

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Saikosaponine v-1

Structure
Zoomed Structure
  • Family: Plantae - Apiaceae
  • Kingdom: Plantae
  • Class: Saponin
    • Subclass: Triterpenoid Saponin
Canonical Smiles OC[C@@H](C([C@@H](COC(=O)[C@]1(C)CC[C@]2(C(=C3C=C[C@H]4[C@@](C3C[C@H]2O)(C)CC[C@@H]2[C@]4(C)CC[C@@H]([C@@]2(C)CO)O[C@@H]2O[C@H](C)[C@@H]([C@@H]([C@H]2O)OC2O[C@H](CO)[C@H]([C@@H]([C@H]2O)O)O)O)C1)CO)O)O)O
InChI InChI=1S/C46H74O19/c1-21-32(54)38(65-39-36(58)35(57)34(56)27(17-48)63-39)37(59)40(62-21)64-31-9-11-44(4)28-7-6-22-23(43(28,3)10-8-29(44)45(31,5)19-49)14-30(53)46(20-50)13-12-42(2,15-24(22)46)41(60)61-18-26(52)33(55)25(51)16-47/h6-7,21,23,25-40,47-59H,8-20H2,1-5H3/t21-,23?,25+,26-,27-,28+,29-,30-,31+,32+,33?,34-,35+,36-,37-,38+,39?,40+,42-,43+,44-,45+,46-/m1/s1
InChIKey FPBFKIPZWCUDIJ-IIVHOMOJSA-N
Formula C46H74O19
HBA 19
HBD 13
MW 931.08
Rotatable Bonds 13
TPSA 326.21
LogP -2.11
Number Rings 7
Number Aromatic Rings 0
Heavy Atom Count 65
Formal Charge 0
Fraction CSP3 0.89
Exact Mass 930.48
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Bupleurum spinosum Apiaceae Plantae 199135

Showing of synonyms

  • Dahmoune A, Smati D, et al. (2020). Triterpene saponins from the roots of Bupleurum spinosum Gouan. Phytochemistry Letters, 2020, 39, 157-161. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: C1CCCC(C1=C23)CCC3C4C(C=C2)C5C(CC4)CC(CC5)OC(OCC6)CC6OC7CCCCO7

Level: 2

Mol. Weight: 931.08 g/mol

Structure

SMILES: C1CCCC(C1=C23)CCC3C4C(C=C2)C5C(CC4)CC(CC5)OC6CCCCO6

Level: 1

Mol. Weight: 931.08 g/mol

Structure

SMILES: C1COCCC1OC2CCCCO2

Level: 1

Mol. Weight: 931.08 g/mol

Structure

SMILES: C1CCCC(C1=C23)CCC3C4C(C=C2)C5C(CC4)CCCC5

Level: 0

Mol. Weight: 931.08 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 931.08 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.54
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
1820.52
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
238769.19

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.67
Plasma Protein Binding
78.15
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
2.0
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Toxic
Bioconcentration Factor
-5547.24
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.35
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
4.07
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-433354456.35
Rat (Acute)
4.03
Rat (Chronic Oral)
4.89
Fathead Minnow
547025.57
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
48735951.67
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-12.06
Log(P)
-0.78
Log S
-2.03
Log(Vapor Pressure)
-1604682.58
Melting Point
252.7
pKa Acid
-11601.29
pKa Basic
-69.08
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.8890
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 3 0.7654
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.7372
Small heat shock protein StHsp14.0 Q970D9 Q970D9_SULTO Sulfurisphaera tokodaii 3 0.7004

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