Daucovirgolide G - Compound Card

Daucovirgolide G

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Daucovirgolide G

Structure
Zoomed Structure
  • Family: Plantae - Umbelliferae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Sesquiterpenoid
Canonical Smiles C/C=C(\C(=O)O[C@]1(C)C(=O)O[C@@H]2[C@@H]1[C@H](/C=C(\C)/CC/C=C(/C2)\C)OC(=O)[C@@]1(C)O[C@H]1C)/C
InChI InChI=1S/C25H34O7/c1-8-16(4)21(26)32-25(7)20-18(29-22(27)24(6)17(5)31-24)12-14(2)10-9-11-15(3)13-19(20)30-23(25)28/h8,11-12,17-20H,9-10,13H2,1-7H3/b14-12+,15-11+,16-8-/t17-,18-,19-,20-,24-,25-/m0/s1
InChIKey MKEDSGMAAWRLGK-VOOWFMLGSA-N
Formula C25H34O7
HBA 7
HBD 0
MW 446.54
Rotatable Bonds 4
TPSA 91.43
LogP 3.96
Number Rings 3
Number Aromatic Rings 0
Heavy Atom Count 32
Formal Charge 0
Fraction CSP3 0.64
Exact Mass 446.23
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Daucus carota Apiaceae Plantae 4039
2 Daucus virgatus Umbelliferae Plantae 1869349
3 Daucus virgatus Umbelliferae Plantae 1869349

Showing of synonyms

  • Sirignano C, Snene A, et al. (2017). Angeloylated Germacranolides from Daucus virgatus and Their Plasmodium Transmission Blocking Activity. J Nat Prod,2017,80(10),2787-2794. [View] [PubMed]
  • Sirignano C, Snene A, et al. (2019). Daucovirgolides I-L, four congeners of the antimalarial daucovirgolide G from Daucus virgatus. Fitoterapia,2019,137,104188. [View] [PubMed]
  • Sirignano C, Hammami S, et al. (2021). Polyoxygenated germacranes from Daucus carota and their antimalarial transmission blocking activity. Phytochemistry, 2021, 183,112632.. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O1CC1C(=O)OC2C=CCCC=CCC(C23)OC(=O)C3

Level: 1

Mol. Weight: 446.54 g/mol

Structure

SMILES: C1C(=O)OC(C12)CC=CCCC=CC2

Level: 0

Mol. Weight: 446.54 g/mol

Structure

SMILES: C1CO1

Level: 0

Mol. Weight: 446.54 g/mol

Anti-plasmodial
Antimalarial

Absorption

Caco-2 (logPapp)
-5.01
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.67
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-3.32

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.53
Plasma Protein Binding
49.09
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
12.5
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.97
Biodegradation
Safe
Carcinogenesis
Toxic
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.58
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
7.07
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-55.01
Rat (Acute)
2.87
Rat (Chronic Oral)
1.92
Fathead Minnow
4.84
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Toxic
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
393.99
Hydration Free Energy
-2.91
Log(D) at pH=7.4
3.72
Log(P)
4.98
Log S
-4.98
Log(Vapor Pressure)
-6.78
Melting Point
82.18
pKa Acid
6.88
pKa Basic
2.2
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 3 0.9141
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 3 0.8140
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7915
Corticosteroid-binding globulin P08185 CBG_HUMAN Homo sapiens 3 0.7643
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7315
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 3 0.7269
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7243

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