Rutaretin - Compound Card

Rutaretin

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Rutaretin

Structure
Zoomed Structure
  • Family: Plantae - Apiaceae
  • Kingdom: Plantae
  • Class: Coumarin
Canonical Smiles O=c1ccc2c(o1)c(O)c1c(c2)C[C@H](O1)C(O)(C)C
InChI InChI=1S/C14H14O5/c1-14(2,17)9-6-8-5-7-3-4-10(15)19-12(7)11(16)13(8)18-9/h3-5,9,16-17H,6H2,1-2H3/t9-/m0/s1
InChIKey FVFQELHSZVFPDZ-VIFPVBQESA-N
Formula C14H14O5
HBA 5
HBD 2
MW 262.26
Rotatable Bonds 1
TPSA 79.9
LogP 1.57
Number Rings 3
Number Aromatic Rings 2
Heavy Atom Count 19
Formal Charge 0
Fraction CSP3 0.36
Exact Mass 262.08
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Deverra battandieri Apiaceae Plantae 1589787

Showing of synonyms

  • Esseid C, León F, et al. (2021). Coumarins and other constituents from Deverra battandieri. Phytochemistry Letters, 2021, 42, 129-133.. [View]

No compound-protein relationship available.

Structure

SMILES: C1COc(c12)cc3c(c2)ccc(=O)o3

Level: 0

Mol. Weight: 262.26 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.73
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.420
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-1.8

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.790
Plasma Protein Binding
63.11
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
8.280
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.950
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.760
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.690
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
2.440
Rat (Acute)
2.390
Rat (Chronic Oral)
1.800
Fathead Minnow
4.020
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
376.310
Hydration Free Energy
-10.750
Log(D) at pH=7.4
0.800
Log(P)
1.43
Log S
-2.71
Log(Vapor Pressure)
-7.28
Melting Point
236.53
pKa Acid
6.69
pKa Basic
5.19
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.9285
Prolyl tripeptidyl peptidase Q7MUW6 PTP_PORGI Porphyromonas gingivalis 3 0.9049
Biflaviolin synthase CYP158A1 Q9KZF5 C1581_STRCO Streptomyces coelicolor / M145) 3 0.8941
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.8747
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.8713
histidine kinase O32393 O32393_ARTPT Arthrospira platensis 3 0.8596
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8394
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 3 0.8371
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.8371
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8369
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.8234
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.8227
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8161
Lysozyme C II P11941 LYSC2_ONCMY Oncorhynchus mykiss 3 0.8143
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.8072
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 3 0.8046
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8042
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7996
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7990
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7965
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7950
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.7926
Sulfide-quinone reductase B7JBP8 SQRD_ACIF2 Acidithiobacillus ferrooxidans) 3 0.7889
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.7808
NADH:flavin oxidoreductase Sye1 Q8EEC8 Q8EEC8_SHEON Shewanella oneidensis 3 0.7782
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7716
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7683
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.7679
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7679
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7676
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform P48736 PK3CG_HUMAN Homo sapiens 3 0.7667
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.7646
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7608
Succinate dehydrogenase flavoprotein subunit P0AC41 SDHA_ECOLI Escherichia coli 3 0.7595
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.7556
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7479
Phenylalanine-4-hydroxylase P00439 PH4H_HUMAN Homo sapiens 3 0.7471
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7466
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.7456
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7446
Biflaviolin synthase CYP158A2 Q9FCA6 C1582_STRCO Streptomyces coelicolor / M145) 3 0.7443
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7417
cGMP-dependent protein kinase 1 Q13976 KGP1_HUMAN Homo sapiens 2 0.7391
Sulfide-quinone reductase B7JBP8 SQRD_ACIF2 Acidithiobacillus ferrooxidans) 4 0.7387
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 2 0.7342
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7291
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 4 0.7283
Protein LlR18A P52778 L18A_LUPLU Lupinus luteus 3 0.7280
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7242
Sulfotransferase 1E1 P49888 ST1E1_HUMAN Homo sapiens 3 0.7235
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7206
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.7197
Gentisate 1,2-dioxygenase Q67FT0 Q67FT0_PSESE Pseudaminobacter salicylatoxidans 2 0.7144
L-lactate dehydrogenase Q5SJA1 LDH_THET8 Thermus thermophilus 3 0.7117
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 2 0.7085
Glutamate receptor 2 P19491 GRIA2_RAT Rattus norvegicus 3 0.7041
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7036
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 3 0.7015

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