Kaempferol 3-O-beta-D-glucopyranosyl-(1→6)-O-beta-D-galactopyranoside - Compound Card

Kaempferol 3-O-beta-D-glucopyranosyl-(1→6)-O-beta-D-galactopyranoside

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Kaempferol 3-O-beta-D-glucopyranosyl-(1→6)-O-beta-D-galactopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Apiaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavonol Glycoside
Canonical Smiles OC[C@@H]1O[C@H](OC[C@@H]2O[C@H](Oc3c(oc4c(c3=O)c(O)cc(c4)O)c3ccc(cc3)O)[C@H]([C@@H]([C@@H]2O)O)O)[C@H]([C@@H]([C@H]1O)O)O
InChI InChI=1S/C27H30O16/c28-7-14-17(32)20(35)22(37)26(41-14)39-8-15-18(33)21(36)23(38)27(42-15)43-25-19(34)16-12(31)5-11(30)6-13(16)40-24(25)9-1-3-10(29)4-2-9/h1-6,14-15,17-18,20-23,26-33,35-38H,7-8H2/t14-,15-,17-,18+,20+,21+,22-,23-,26-,27+/m0/s1
InChIKey BITPRCODIALMOV-OYMCNUNBSA-N
Formula C27H30O16
HBA 16
HBD 10
MW 610.52
Rotatable Bonds 7
TPSA 269.43
LogP -2.42
Number Rings 5
Number Aromatic Rings 3
Heavy Atom Count 43
Formal Charge 0
Fraction CSP3 0.44
Exact Mass 610.15
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Eryngium tricuspidatum Apiaceae Plantae 488472

Showing of synonyms

  • Benmerache A, Magid A.A, et al. (2016). Chemical composition, antibacterial, antioxidant and tyrosinase inhibitory activities of glycosides from aerial parts of Eryngium tricuspidatum. Phytochemistry Letters, 2016, 18, 23 - 28. [View]

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1OCC2CCCC(O2)Oc(c3=O)c(-c4ccccc4)oc(c35)cccc5

Level: 3

Mol. Weight: 610.52 g/mol

Structure

SMILES: O1CCCCC1OCC2CCCC(O2)Oc(c3=O)coc(c34)cccc4

Level: 2

Mol. Weight: 610.52 g/mol

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)OC4CCCCO4

Level: 2

Mol. Weight: 610.52 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)OC3CCCCO3

Level: 1

Mol. Weight: 610.52 g/mol

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccccc3

Level: 1

Mol. Weight: 610.52 g/mol

Structure

SMILES: O1CCCCC1COC2CCCCO2

Level: 1

Mol. Weight: 610.52 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 610.52 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 610.52 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 610.52 g/mol

Antibacterial
Antioxidant

Absorption

Caco-2 (logPapp)
-6.48
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.380
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
10.82

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.760
Plasma Protein Binding
66.89
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
8.500
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-3.740
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.900
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.920
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-15326.390
Rat (Acute)
2.340
Rat (Chronic Oral)
4.060
Fathead Minnow
33.580
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
476.020
Hydration Free Energy
-2.930
Log(D) at pH=7.4
-0.670
Log(P)
-0.25
Log S
-4.3
Log(Vapor Pressure)
-15.69
Melting Point
217.57
pKa Acid
3.72
pKa Basic
8.22
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.9514
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.9253
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 4 0.8918
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8867
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8842
Ribosomal protein S6 kinase alpha-3 P18654 KS6A3_MOUSE Mus musculus 6 0.8826
Nodulin-13 P93330 NOD13_MEDTR Medicago truncatula 3 0.8773
Histone deacetylase 4 P56524 HDAC4_HUMAN Homo sapiens 3 0.8739
Disks large homolog 1 Q12959 DLG1_HUMAN Homo sapiens 4 0.8691
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.8578
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.8577
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8508
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8442
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.8398
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.8337
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8295
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.8269
Rhodopsin kinase GRK1 P28327 GRK1_BOVIN Bos taurus 3 0.8143
Botulinum neurotoxin type A P0DPI0 BXA1_CLOBO Clostridium botulinum 3 0.8134
Cyclic dipeptide N-prenyltransferase D1D8L6 D1D8L6_ASPFM Neosartorya fumigata 3 0.8123
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.8110
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.8063
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.8033
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.8008
Tyrosine-protein kinase JAK3 P52333 JAK3_HUMAN Homo sapiens 3 0.8005
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7998
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7983
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7920
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 5 0.7914
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7872
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 4 0.7867
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7732
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 3 0.7712
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.7705
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7663
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7602
ATP synthase subunit alpha, mitochondrial P19483 ATPA_BOVIN Bos taurus 3 0.7506
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 2 0.7471
Beta-secretase 2 Q9Y5Z0 BACE2_HUMAN Homo sapiens 2 0.7467
Gag-Pol polyprotein P04584 POL_HV2RO Human immunodeficiency virus type 2 subtype A 4 0.7434
Anthocyanidin 3-O-glucosyltransferase UFGT P51094 UFOG_VITVI Vitis vinifera 4 0.7366
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7338
APH(2'')-Id O68183 O68183_ENTCA Enterococcus casseliflavus 4 0.7305
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7293
Glutathione S-transferase F2 P46422 GSTF2_ARATH Arabidopsis thaliana 3 0.7276
O-methyltransferase family 2 D5STZ7 D5STZ7_PLAL2 Planctopirus limnophila 4 0.7254
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7243
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7233
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7231
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7193
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 2 0.7187
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.7150
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.7138
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7125
Cytosolic purine 5'-nucleotidase P49902 5NTC_HUMAN Homo sapiens 2 0.7087
Serine/threonine-protein kinase PLK1 P53350 PLK1_HUMAN Homo sapiens 3 0.7084
3-phosphoinositide-dependent protein kinase 1 O15530 PDPK1_HUMAN Homo sapiens 3 0.7079
Ras-related protein Ral-B P11234 RALB_HUMAN Homo sapiens 3 0.7074
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7064
Flavin reductase (NADPH) P30043 BLVRB_HUMAN Homo sapiens 3 0.7063

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