10-hydroxy camptothecin - Compound Card

10-hydroxy camptothecin

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10-hydroxy camptothecin

Structure
Zoomed Structure
  • Family: Plantae - Apocynaceae
  • Kingdom: Plantae
  • Class: Alkaloid
Canonical Smiles CC[C@@]1(O)C(=O)OCc2c1cc1c3nc4ccc(cc4cc3Cn1c2=O)O
InChI InChI=1S/C20H16N2O5/c1-2-20(26)14-7-16-17-11(5-10-6-12(23)3-4-15(10)21-17)8-22(16)18(24)13(14)9-27-19(20)25/h3-7,23,26H,2,8-9H2,1H3/t20-/m0/s1
InChIKey HAWSQZCWOQZXHI-FQEVSTJZSA-N
Formula C20H16N2O5
HBA 7
HBD 2
MW 364.36
Rotatable Bonds 1
TPSA 101.65
LogP 1.79
Number Rings 5
Number Aromatic Rings 3
Heavy Atom Count 27
Formal Charge 0
Fraction CSP3 0.25
Exact Mass 364.11
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Pachypodium lamerei Apocynaceae Plantae 69385

Showing of synonyms

  • Mina S.A, Mohamed S.A, et al. (2020). LC-ESI-MS/MS profiling of alkaloids and antiproliferative activity of Pachypoduim lamerei drake leaves. Natural product research, 2020, 34(9), 1292-1296. [View] [PubMed]
CPRiL: 73456
Structure

SMILES: c1cccc(n2)c1cc(c23)Cn4c3cc5c(c4=O)COC(=O)C5

Level: 0

Mol. Weight: 364.36 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.02
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.9
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-1.41

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.09
Plasma Protein Binding
63.93
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
5.56
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
0.17
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.14
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.65
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-10.11
Rat (Acute)
2.75
Rat (Chronic Oral)
1.72
Fathead Minnow
4.82
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Toxic

General Properties

Boiling Point
511.89
Hydration Free Energy
-7.43
Log(D) at pH=7.4
1.43
Log(P)
1.4
Log S
-3.94
Log(Vapor Pressure)
-10.63
Melting Point
339.29
pKa Acid
9.44
pKa Basic
5.13
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.9538
Histone deacetylase 4 P56524 HDAC4_HUMAN Homo sapiens 3 0.9120
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.8994
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.8823
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.8816
Multidrug-efflux transporter 1 regulator P39075 BMRR_BACSU Bacillus subtilis 3 0.8771
AGAP003309-PA A0A1U7F4W2 A0A1U7F4W2_ANOGA Anopheles gambiae 3 0.8697
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8640
Retinol dehydratase Q26490 Q26490_SPOFR Spodoptera frugiperda 4 0.8585
Phosphodiesterase Q53I60 Q53I60_TRYCR Trypanosoma cruzi 4 0.8582
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.8564
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8525
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8522
Peroxisome proliferator-activated receptor gamma P37231 PPARG_HUMAN Homo sapiens 4 0.8494
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.8455
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.8342
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.8310
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.8267
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.8165
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 3 0.8165
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 3 0.8163
Collagenase 3 P45452 MMP13_HUMAN Homo sapiens 4 0.8033
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.7943
17beta-hydroxysteroid dehydrogenase O93874 O93874_COCLU Cochliobolus lunatus 3 0.7819
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.7815
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase F6MZ55 F6MZ55_9FIRM Sporomusa ovata 3 0.7755
Tyrosine-protein kinase Lck P06239 LCK_HUMAN Homo sapiens 3 0.7695
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.7678
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.7545
Biotin carboxylase P24182 ACCC_ECOLI Escherichia coli 3 0.7543
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.7515
Jasmonoyl--L-amino acid synthetase JAR1 Q9SKE2 JAR1_ARATH Arabidopsis thaliana 3 0.7511
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.7500
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7479
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.7479
Matrix metalloproteinase-9 P14780 MMP9_HUMAN Homo sapiens 3 0.7448
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7394
cGMP-inhibited 3',5'-cyclic phosphodiesterase 3B Q13370 PDE3B_HUMAN Homo sapiens 3 0.7392
Genome polyprotein O92972 POLG_HCVJ4 Hepatitis C virus genotype 1b 3 0.7332
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7326
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 4 0.7286
Streptavidin P22629 SAV_STRAV Streptomyces avidinii 3 0.7270
Aromatase P11511 CP19A_HUMAN Homo sapiens 3 0.7246
Collagenase 3 P45452 MMP13_HUMAN Homo sapiens 4 0.7243
HTH-type transcriptional regulator TtgR Q9AIU0 TTGR_PSEPT Pseudomonas putida 3 0.7232
IOMT 3 Q06YR3 Q06YR3_MEDTR Medicago truncatula 3 0.7231
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 2 0.7226
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 3 0.7206
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7184
Transthyretin P02766 TTHY_HUMAN Homo sapiens 4 0.7127
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7083
Gag-Pol polyprotein P03367 POL_HV1BR Human immunodeficiency virus type 1 group M subtype B 3 0.7082
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 3 0.7077
Cytochrome P450 3A4 P08684 CP3A4_HUMAN Homo sapiens 3 0.7042
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7021
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Q8DNV6 Q8DNV6_STRR6 Streptococcus pneumoniae 2 0.7004

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