Indole-3-carbinol - Compound Card

Indole-3-carbinol

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Indole-3-carbinol

Structure
Zoomed Structure
  • Family: Plantae - Arecaceae
  • Kingdom: Plantae
  • Class: Indole
    • Subclass: Alkylindole
Canonical Smiles OCc1c[nH]c2c1cccc2
InChI InChI=1S/C9H9NO/c11-6-7-5-10-9-4-2-1-3-8(7)9/h1-5,10-11H,6H2
InChIKey IVYPNXXAYMYVSP-UHFFFAOYSA-N
Formula C9H9NO
HBA 1
HBD 2
MW 147.18
Rotatable Bonds 1
TPSA 36.02
LogP 1.66
Number Rings 2
Number Aromatic Rings 2
Heavy Atom Count 11
Formal Charge 0
Fraction CSP3 0.11
Exact Mass 147.07
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Sabal palmetto Arecaceae Plantae

Showing of synonyms

  • El-Hawwary S.S, Saber F.R, et al. (2018). Cytotoxic potential of three Sabal species grown in Egypt: A metabolomic and docking-based study. Natural product research, 2018, 32(7), 810-814. [View] [PubMed]
Pubchem: 3712
Chebi: 24814
Nmrshiftdb2: 20221552
Metabolights: MTBLC24814
Drugbank: DB12881
Pdb Ligand: FXK
CPRiL: 16841
Structure

SMILES: c1c[nH]c(c12)cccc2

Level: 0

Mol. Weight: 147.18 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.58
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-3.83
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.87

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.5
Plasma Protein Binding
28.06
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
8.75
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
0.57
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
-0.27
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.36
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Toxic
NR-ER
Safe
NR-ER-LBD
Toxic
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
2.26
Rat (Acute)
1.79
Rat (Chronic Oral)
2.36
Fathead Minnow
3.55
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
324.54
Hydration Free Energy
-10.16
Log(D) at pH=7.4
1.24
Log(P)
1.09
Log S
-1.54
Log(Vapor Pressure)
-4.91
Melting Point
119.95
pKa Acid
13.16
pKa Basic
6.77
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.9594
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.9482
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.9436
Dual specificity mitogen-activated protein kinase kinase 1 Q02750 MP2K1_HUMAN Homo sapiens 3 0.9351
Thiamine-phosphate synthase P39594 THIE_BACSU Bacillus subtilis 3 0.9297
Biotin carboxylase P24182 ACCC_ECOLI Escherichia coli 3 0.9265
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase F6MZ55 F6MZ55_9FIRM Sporomusa ovata 3 0.9197
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.9064
AGAP003309-PA A0A1U7F4W2 A0A1U7F4W2_ANOGA Anopheles gambiae 3 0.9027
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.8773
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.8771
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8623
Pteridine reductase, putative Q581W1 Q581W1_TRYB2 Trypanosoma brucei brucei 3 0.8529
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 3 0.8462
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 4 0.8342
Gag-Pol polyprotein P03366 POL_HV1B1 Human immunodeficiency virus type 1 group M subtype B 3 0.8263
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.8244
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 4 0.8218
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 3 0.8044
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 4 0.8041
Gag-Pol polyprotein P03366 POL_HV1B1 Human immunodeficiency virus type 1 group M subtype B 3 0.7893
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase O67060 ISPE_AQUAE Aquifex aeolicus 3 0.7796
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7779
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 4 0.7766
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7752
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7730
Dihydrofolate reductase P0ABQ4 DYR_ECOLI Escherichia coli 3 0.7712
Dihydrofolate reductase P0ABQ4 DYR_ECOLI Escherichia coli 3 0.7665
Poly [ADP-ribose] polymerase 1 P09874 PARP1_HUMAN Homo sapiens 3 0.7653
Pteridine reductase O76290 O76290_TRYBB Trypanosoma brucei brucei 2 0.7651
Androgen receptor P10275 ANDR_HUMAN Homo sapiens 2 0.7645
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase O33877 FABA_PSEAE Pseudomonas aeruginosa 3 0.7616
Fructose-1,6-bisphosphatase 1 P00636 F16P1_PIG Sus scrofa 3 0.7611
N-acetyltransferase domain-containing protein Q9HV14 Q9HV14_PSEAE Pseudomonas aeruginosa 2 0.7594
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7558
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 3 0.7535
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 2 0.7510
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 2 0.7508
Achbp I6L8L2 I6L8L2_CAPTE Capitella teleta 3 0.7478
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 3 0.7458
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.7453
Androgen receptor P10275 ANDR_HUMAN Homo sapiens 2 0.7436
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7416
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7400
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.7397
Purine nucleoside phosphorylase P50389 PNPH_SACS2 Saccharolobus solfataricus 3 0.7381
Thymidine kinase P0DTH5 KITH_HHV11 Human herpesvirus 1 2 0.7379
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7376
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7375
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7374
cAMP-dependent protein kinase catalytic subunit alpha P17612 KAPCA_HUMAN Homo sapiens 3 0.7367
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7365
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.7331
3-hydroxyanthranilate 3,4-dioxygenase Q1LCS4 3HAO_CUPMC Cupriavidus metallidurans 2 0.7327
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7324
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.7299
Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial Q8N5Z0 AADAT_HUMAN Homo sapiens 2 0.7293
Catechol 2,3-dioxygenase Q6REQ5 Q6REQ5_9NOCA Rhodococcus sp. DK17 3 0.7287
Metallo-beta-lactamase type 2 P26918 BLAB_AERHY Aeromonas hydrophila 2 0.7284
Casein kinase II subunit alpha' P19784 CSK22_HUMAN Homo sapiens 2 0.7262
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 2 0.7261
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7252
LIM domain kinase 1 P53667 LIMK1_HUMAN Homo sapiens 2 0.7242
Carbonic anhydrase 12 O43570 CAH12_HUMAN Homo sapiens 2 0.7207
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.7205
Glutamate receptor 2 P19491 GRIA2_RAT Rattus norvegicus 2 0.7203
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 2 0.7189
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 2 0.7187
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 2 0.7180
Gag-Pol polyprotein P03369 POL_HV1A2 Human immunodeficiency virus type 1 group M subtype B 2 0.7164
Death-associated protein kinase 3 O43293 DAPK3_HUMAN Homo sapiens 2 0.7160
Aromatase P11511 CP19A_HUMAN Homo sapiens 2 0.7159
Progesterone receptor P06401 PRGR_HUMAN Homo sapiens 2 0.7156
1-deoxy-D-xylulose 5-phosphate reductoisomerase P45568 DXR_ECOLI Escherichia coli 2 0.7137
Thiamine-phosphate synthase P39594 THIE_BACSU Bacillus subtilis 2 0.7132
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 2 0.7132
Androgen receptor P10275 ANDR_HUMAN Homo sapiens 2 0.7125
Glutamate receptor 2 P19491 GRIA2_RAT Rattus norvegicus 2 0.7123
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7112
Cyclic GMP-AMP phosphodiesterase SMPDL3A Q92484 ASM3A_HUMAN Homo sapiens 2 0.7101
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 2 0.7099
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7097
Prothrombin P00734 THRB_HUMAN Homo sapiens 2 0.7081
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7078
Thymidine kinase P0DTH5 KITH_HHV11 Human herpesvirus 1 2 0.7074
3-phosphoinositide-dependent protein kinase 1 O15530 PDPK1_HUMAN Homo sapiens 3 0.7073
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7069
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 2 0.7056
Norsolorinic acid synthase Q12053 AFLC_ASPPU Aspergillus parasiticus 2 0.7047
cAMP-dependent protein kinase catalytic subunit alpha P00517 KAPCA_BOVIN Bos taurus 2 0.7041
Formate--tetrahydrofolate ligase P21164 FTHS_MOOTH Moorella thermoacetica 2 0.7040
Pyridoxal kinase O00764 PDXK_HUMAN Homo sapiens 2 0.7027
SKP1-like protein 1A Q39255 SKP1A_ARATH Arabidopsis thaliana 2 0.7018
4-chlorobenzoyl CoA ligase Q8GN86 Q8GN86_9BURK Alcaligenes sp. AL3007 2 0.7013
L-lactate dehydrogenase A chain P13491 LDHA_RABIT Oryctolagus cuniculus 2 0.7008

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