Scirpusin A - Compound Card

Scirpusin A

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Scirpusin A

Structure
Zoomed Structure
  • Family: Plantae - Arecaceae
  • Kingdom: Plantae
  • Class: Stilbenoid
    • Subclass: Hydroxystilbene
Canonical Smiles Oc1cc(/C=C/c2ccc(cc2)O)c2c(c1)OC(C2c1cc(O)cc(c1)O)c1ccc(c(c1)O)O
InChI InChI=1S/C28H22O7/c29-19-6-2-15(3-7-19)1-4-16-9-22(32)14-25-26(16)27(18-10-20(30)13-21(31)11-18)28(35-25)17-5-8-23(33)24(34)12-17/h1-14,27-34H/b4-1+
InChIKey VJVQHVVOEFJLIO-DAFODLJHSA-N
Formula C28H22O7
HBA 7
HBD 6
MW 470.48
Rotatable Bonds 4
TPSA 130.61
LogP 5.36
Number Rings 5
Number Aromatic Rings 4
Heavy Atom Count 35
Formal Charge 0
Fraction CSP3 0.07
Exact Mass 470.14
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Syagrus romanzoffiana Arecaceae Plantae 290277

Showing of synonyms

  • El-Hawary S.S, Fathy F.I, et al. (2021). Anticholinesterase activity and metabolite profiling of Syagrus romanzoffiana (Cham.) Glassman leaves and fruits via UPLC–QTOF–PDA–MS. Natural product research, 2021, 35(10), 1671-1675. [View] [PubMed]
Pubchem: 5458896
Nmrshiftdb2: 60032843

No compound-protein relationship available.

Structure

SMILES: c1ccccc1C=Cc2cccc(c23)OC(c4ccccc4)C3c5ccccc5

Level: 3

Mol. Weight: 470.48 g/mol

Structure

SMILES: c1ccccc1C=Cc2cccc(c23)OCC3c4ccccc4

Level: 2

Mol. Weight: 470.48 g/mol

Structure

SMILES: c1ccccc1C=Cc2cccc(c23)OC(C3)c4ccccc4

Level: 2

Mol. Weight: 470.48 g/mol

Structure

SMILES: c1cccc(c12)OC(c3ccccc3)C2c4ccccc4

Level: 2

Mol. Weight: 470.48 g/mol

Structure

SMILES: c1ccccc1C=Cc2cccc(c23)OCC3

Level: 1

Mol. Weight: 470.48 g/mol

Structure

SMILES: c1cccc(c12)OCC2c3ccccc3

Level: 1

Mol. Weight: 470.48 g/mol

Structure

SMILES: c1cccc(c12)OC(C2)c3ccccc3

Level: 1

Mol. Weight: 470.48 g/mol

Structure

SMILES: C1COc(c12)cccc2

Level: 0

Mol. Weight: 470.48 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 470.48 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.01
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-5.120
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
0.44

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.320
Plasma Protein Binding
84.28
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
7.010
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.320
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
1.420
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
6.120
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Toxic
NR-ER-LBD
Toxic
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-512.950
Rat (Acute)
2.190
Rat (Chronic Oral)
3.570
Fathead Minnow
7.130
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Toxic
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
608.840
Hydration Free Energy
-3.340
Log(D) at pH=7.4
2.600
Log(P)
4.85
Log S
-4.18
Log(Vapor Pressure)
-11.6
Melting Point
291.16
pKa Acid
7.42
pKa Basic
10.48
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 4 0.8895
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.8889
Heat shock protein HSP 90-beta P08238 HS90B_HUMAN Homo sapiens 3 0.8454
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.8370
Calmodulin P62157 CALM_BOVIN Bos taurus 3 0.8335
Maltose/maltodextrin-binding periplasmic protein P0AEX9 MALE_ECOLI Escherichia coli 3 0.8322
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8288
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.8170
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8111
NAD(P)H-hydrate epimerase Q8K4Z3 NNRE_MOUSE Mus musculus 3 0.8111
Beta-lactamase Q9L5C8 Q9L5C8_ECOLX Escherichia coli 3 0.8013
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 3 0.7878
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7844
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7764
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7669
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Q04631 FNTA_RAT Rattus norvegicus 3 0.7654
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.7636
Focal adhesion kinase 1 Q05397 FAK1_HUMAN Homo sapiens 4 0.7623
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7620
Catechol O-methyltransferase P22734 COMT_RAT Rattus norvegicus 3 0.7544
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7532
Secoisolariciresinol dehydrogenase Q94KL8 SILD_PODPE Podophyllum peltatum 4 0.7493
tyrosine--tRNA ligase Q4QFJ7 Q4QFJ7_LEIMA Leishmania major 3 0.7462
Phenylalanine-4-hydroxylase P00439 PH4H_HUMAN Homo sapiens 3 0.7427
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.7417
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.7415
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7386
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.7346
Collagenase 3 P45452 MMP13_HUMAN Homo sapiens 3 0.7289
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7255
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7238
cGMP-specific 3',5'-cyclic phosphodiesterase O76074 PDE5A_HUMAN Homo sapiens 4 0.7208
HTH-type transcriptional regulator QacR P0A0N4 QACR_STAAU Staphylococcus aureus 3 0.7207
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 2 0.7154
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7123
Aminopeptidase N P04825 AMPN_ECOLI Escherichia coli 3 0.7117
Genome polyprotein O92972 POLG_HCVJ4 Hepatitis C virus genotype 1b 3 0.7092
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7090
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7080
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7044
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7008
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7005

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