Retrojusticidin B - Compound Card

Retrojusticidin B

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Retrojusticidin B

Structure
Zoomed Structure
  • Family: Plantae - Arecaceae
  • Kingdom: Plantae
  • Class: Arylnaphthalene
Canonical Smiles COc1cc2c(cc1OC)cc1c(c2c2ccc3c(c2)OCO3)COC1=O
InChI InChI=1S/C21H16O6/c1-23-17-7-12-5-14-15(9-25-21(14)22)20(13(12)8-18(17)24-2)11-3-4-16-19(6-11)27-10-26-16/h3-8H,9-10H2,1-2H3
InChIKey TXDMVCNSUVLKHW-UHFFFAOYSA-N
Formula C21H16O6
HBA 6
HBD 0
MW 364.35
Rotatable Bonds 3
TPSA 63.22
LogP 3.92
Number Rings 5
Number Aromatic Rings 3
Heavy Atom Count 27
Formal Charge 0
Fraction CSP3 0.19
Exact Mass 364.09
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Syagrus romanzoffiana Arecaceae Plantae 290277

Showing of synonyms

  • El-Hawary S.S, Fathy F.I, et al. (2021). Anticholinesterase activity and metabolite profiling of Syagrus romanzoffiana (Cham.) Glassman leaves and fruits via UPLC–QTOF–PDA–MS. Natural product research, 2021, 35(10), 1671-1675. [View] [PubMed]
Pubchem: 460888
Nmrshiftdb2: 60070873
Bindingdb: 50240576
CPRiL: 381985
Structure

SMILES: c1cccc(c2)c1c(c(c23)COC3=O)-c(c4)ccc(c45)OCO5

Level: 1

Mol. Weight: 364.35 g/mol

Structure

SMILES: O=C1OCc(c12)cc3c(c2)cccc3

Level: 0

Mol. Weight: 364.35 g/mol

Structure

SMILES: O1COc(c12)cccc2

Level: 0

Mol. Weight: 364.35 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.02
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.780
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.05

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
1.350
Plasma Protein Binding
74.8
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
10.950
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.760
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
1.140
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
6.100
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-13.820
Rat (Acute)
2.580
Rat (Chronic Oral)
1.440
Fathead Minnow
5.620
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Toxic
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
495.820
Hydration Free Energy
-5.890
Log(D) at pH=7.4
2.910
Log(P)
3.34
Log S
-5.07
Log(Vapor Pressure)
-8.71
Melting Point
201.16
pKa Acid
9.41
pKa Basic
1.76
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.9787
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.9710
2-phospho-L-lactate transferase Q8PVT6 COFD_METMA Methanosarcina mazei 3 0.9325
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.9186
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8753
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 3 0.8661
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8632
Alpha-ketoglutarate-dependent dioxygenase FTO Q9C0B1 FTO_HUMAN Homo sapiens 3 0.8626
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.8606
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.8604
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.8499
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.8488
Activin receptor type-1 Q04771 ACVR1_HUMAN Homo sapiens 3 0.8324
11-beta-hydroxysteroid dehydrogenase 1 Q6QLL4 DHI1_CAVPO Cavia porcellus 3 0.8252
Streptogramin A acetyltransferase P50870 VATD_ENTFC Enterococcus faecium 3 0.8210
Thymidylate synthase P0A886 TYSY_ECO57 Escherichia coli O157:H7 3 0.8168
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform P48736 PK3CG_HUMAN Homo sapiens 4 0.8076
Bromodomain testis-specific protein Q58F21 BRDT_HUMAN Homo sapiens 3 0.8052
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.8030
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.7984
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7914
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7852
Catechol O-methyltransferase P22734 COMT_RAT Rattus norvegicus 3 0.7851
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7815
cGMP-specific 3',5'-cyclic phosphodiesterase O76074 PDE5A_HUMAN Homo sapiens 3 0.7803
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 3 0.7767
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7725
Focal adhesion kinase 1 Q00944 FAK1_CHICK Gallus gallus 3 0.7722
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 3 0.7707
Phytohormone-binding protein CSBP A0A1S3THR8 PHBP_VIGRR Vigna radiata var. radiata 3 0.7706
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.7678
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 3 0.7655
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7644
Vascular endothelial growth factor receptor 2 P35968 VGFR2_HUMAN Homo sapiens 3 0.7627
Protein ppBat Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron VPI-5482 2 0.7604
Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase Q46381 BPHB_COMTE Comamonas testosteroni 3 0.7603
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7568
Casein kinase I isoform gamma-3 Q9Y6M4 KC1G3_HUMAN Homo sapiens 3 0.7534
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7520
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7495
Catechol O-methyltransferase P22734 COMT_RAT Rattus norvegicus 3 0.7467
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 3 0.7466
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7465
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7463
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7454
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7433
Tyrosine-protein kinase Lck P06239 LCK_HUMAN Homo sapiens 3 0.7432
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7419
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 3 0.7410
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7386
Tyrosine-protein kinase Lck P06239 LCK_HUMAN Homo sapiens 4 0.7338
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.7314
Mitogen-activated protein kinase 10 P53779 MK10_HUMAN Homo sapiens 3 0.7308
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7306
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7304
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7294
ATP synthase subunit alpha, mitochondrial P19483 ATPA_BOVIN Bos taurus 3 0.7276
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 2 0.7248
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7241
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7236
Ephrin type-B receptor 4 P54760 EPHB4_HUMAN Homo sapiens 3 0.7228
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7216
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 3 0.7204
Tyrosine-protein kinase Lck P06239 LCK_HUMAN Homo sapiens 3 0.7177
Gag-Pol polyprotein P03366 POL_HV1B1 Human immunodeficiency virus type 1 group M subtype B 3 0.7168
Mitogen-activated protein kinase 1 P63086 MK01_RAT Rattus norvegicus 3 0.7158
Enoyl-ACP reductase Q9BJJ9 Q9BJJ9_PLAFA Plasmodium falciparum 3 0.7146
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform P48736 PK3CG_HUMAN Homo sapiens 3 0.7136
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.7125
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 2 0.7110
Dipeptidyl peptidase 4 P27487 DPP4_HUMAN Homo sapiens 3 0.7105
DNA-directed DNA polymerase Q38087 DPOL_BPR69 Escherichia phage RB69 2 0.7048
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7021
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 3 0.7011

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