Isorhamentin 3-O-beta-D-glucoside - Compound Card

Isorhamentin 3-O-beta-D-glucoside

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Isorhamentin 3-O-beta-D-glucoside

Structure
Zoomed Structure
  • Family: Plantae - Asteraceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavone Glucoside
Canonical Smiles OCC1O[C@@H](Oc2c(oc3c(c2=O)c(O)cc(c3)O)c2ccc(c(c2)OC)O)[C@H](C([C@@H]1O)O)O
InChI InChI=1S/C22H22O12/c1-31-12-4-8(2-3-10(12)25)20-21(17(28)15-11(26)5-9(24)6-13(15)32-20)34-22-19(30)18(29)16(27)14(7-23)33-22/h2-6,14,16,18-19,22-27,29-30H,7H2,1H3/t14?,16-,18?,19+,22+/m1/s1
InChIKey CQLRUIIRRZYHHS-OKCRKLNBSA-N
Formula C22H22O12
HBA 12
HBD 7
MW 478.41
Rotatable Bonds 5
TPSA 199.51
LogP -0.24
Number Rings 4
Number Aromatic Rings 3
Heavy Atom Count 34
Formal Charge 0
Fraction CSP3 0.32
Exact Mass 478.11
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Senecio glaucus Asteraceae Plantae 121546

Showing of synonyms

  • Zaher A.M, Sultan R, et al. (2022). New antimicrobial and cytotoxic benzofuran glucoside from Senecio glaucus L. Natural product research, 2022, 36(1), 136-141. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)OC4CCCCO4

Level: 2

Mol. Weight: 478.41 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)OC3CCCCO3

Level: 1

Mol. Weight: 478.41 g/mol

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccccc3

Level: 1

Mol. Weight: 478.41 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 478.41 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 478.41 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 478.41 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.65
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.46
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
1.28

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.86
Plasma Protein Binding
64.02
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
14.8
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.24
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
1.09
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.37
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-184.47
Rat (Acute)
2.3
Rat (Chronic Oral)
4.24
Fathead Minnow
3.93
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
628.39
Hydration Free Energy
-3.77
Log(D) at pH=7.4
0.48
Log(P)
0.15
Log S
-4.61
Log(Vapor Pressure)
-11.19
Melting Point
192.9
pKa Acid
4.93
pKa Basic
6.35
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.9378
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.9251
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 3 0.9204
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.8990
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8959
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.8939
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8887
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.8819
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8720
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8574
Lactoperoxidase A0A452E9Y6 PERL_CAPHI Capra hircus 3 0.8556
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8543
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8537
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 6 0.8513
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.8478
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 4 0.8419
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8405
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.8401
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 3 0.8304
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.8282
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.8282
tyrosine--tRNA ligase Q4QFJ7 Q4QFJ7_LEIMA Leishmania major 4 0.8254
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 4 0.8222
Ras-related protein Ral-B P11234 RALB_HUMAN Homo sapiens 3 0.8153
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.8042
Ribosomal protein S6 kinase alpha-3 P18654 KS6A3_MOUSE Mus musculus 6 0.8030
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.8000
Rhodopsin kinase GRK1 P28327 GRK1_BOVIN Bos taurus 3 0.7990
ATP synthase subunit alpha, mitochondrial P19483 ATPA_BOVIN Bos taurus 3 0.7973
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7954
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7927
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7921
Hypoxanthine phosphoribosyltransferase Q4DRC4 Q4DRC4_TRYCC Trypanosoma cruzi 3 0.7897
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.7888
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7877
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7877
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7820
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7767
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.7755
HTH-type transcriptional regulator TtgR Q9AIU0 TTGR_PSEPT Pseudomonas putida 3 0.7752
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.7701
Tyrosine-protein kinase JAK3 P52333 JAK3_HUMAN Homo sapiens 3 0.7653
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 3 0.7645
Stromelysin-1 P08254 MMP3_HUMAN Homo sapiens 3 0.7642
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.7628
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.7626
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.7624
Gag-Pol polyprotein P05896 POL_SIVM1 Simian immunodeficiency virus 4 0.7610
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7551
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7507
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7466
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7432
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 4 0.7427
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7422
APH(2'')-Id O68183 O68183_ENTCA Enterococcus casseliflavus 4 0.7421
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7393
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.7342
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 3 0.7338
Nucleoside diphosphate kinase A 2 P52175 NDKA2_BOVIN Bos taurus 4 0.7324
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7323
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.7280
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7258
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7249
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7215
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7210
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7180
Beta-hexosaminidase Q9KU37 NAGZ_VIBCH Vibrio cholerae serotype O1 3 0.7158
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.7158
Protein ppBat Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron VPI-5482 3 0.7134
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7125
3-hydroxyanthranilate 3,4-dioxygenase Q1LCS4 3HAO_CUPMC Cupriavidus metallidurans 2 0.7123
Serine/threonine-protein kinase PLK1 P53350 PLK1_HUMAN Homo sapiens 3 0.7119
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta P78356 PI42B_HUMAN Homo sapiens 4 0.7100
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.7092
Cytosolic purine 5'-nucleotidase P49902 5NTC_HUMAN Homo sapiens 2 0.7087
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7084
Carbonyl reductase [NADPH] 1 P16152 CBR1_HUMAN Homo sapiens 2 0.7075
Avidin P02701 AVID_CHICK Gallus gallus 3 0.7074
Small heat shock protein StHsp14.0 Q970D9 Q970D9_SULTO Sulfurisphaera tokodaii 3 0.7068
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7052
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7050
Kinesin-like protein KIF11 P52732 KIF11_HUMAN Homo sapiens 3 0.7046
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7038
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.7029
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7022

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