Bignanoside A - Compound Card

Bignanoside A

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Bignanoside A

Structure
Zoomed Structure
  • Family: Plantae - Bignoniaceae
  • Kingdom: Plantae
  • Class: Lignan
    • Subclass: Neolignan Glucoside
Canonical Smiles COC/C=C/c1cc2[C@@H](CO)[C@@H](Oc2c(c1)OC)c1cc(OC)c(c(c1)OC)OC1OC(CO)C(C(C1O)O)O
InChI InChI=1S/C28H36O12/c1-34-7-5-6-14-8-16-17(12-29)25(39-26(16)18(9-14)35-2)15-10-19(36-3)27(20(11-15)37-4)40-28-24(33)23(32)22(31)21(13-30)38-28/h5-6,8-11,17,21-25,28-33H,7,12-13H2,1-4H3/b6-5+/t17-,21?,22?,23?,24?,25+,28?/m1/s1
InChIKey LFELCLOETGGLCC-NRKFYRBPSA-N
Formula C28H36O12
HBA 12
HBD 5
MW 564.58
Rotatable Bonds 11
TPSA 165.76
LogP 0.76
Number Rings 4
Number Aromatic Rings 2
Heavy Atom Count 40
Formal Charge 0
Fraction CSP3 0.5
Exact Mass 564.22
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Bignonia binata Bignoniaceae Plantae 680235

Showing of synonyms

  • Mahmoud B, Samy M, et al. (2020). Bignanoside A "A new neolignan glucoside" and bignanoside B "A new iridoid glucoside" from Bignonia binata leaves. Phytochemistry Letters, 2020, 35, 200-205. [View]

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)OC(C2)c3ccc(cc3)OC4CCCCO4

Level: 2

Mol. Weight: 564.58 g/mol

Structure

SMILES: c1cccc(c12)OC(C2)c3ccccc3

Level: 1

Mol. Weight: 564.58 g/mol

Structure

SMILES: c1ccccc1OC2CCCCO2

Level: 1

Mol. Weight: 564.58 g/mol

Structure

SMILES: C1COc(c12)cccc2

Level: 0

Mol. Weight: 564.58 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 564.58 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 564.58 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.15
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-4.840
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
1.17

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.960
Plasma Protein Binding
41.04
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
5.750
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-0.830
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.400
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
5.720
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-4863.740
Rat (Acute)
2.650
Rat (Chronic Oral)
4.340
Fathead Minnow
14.610
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Toxic
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
433.230
Hydration Free Energy
-2.920
Log(D) at pH=7.4
1.070
Log(P)
-0.15
Log S
-3.37
Log(Vapor Pressure)
-9.53
Melting Point
166.63
pKa Acid
7.04
pKa Basic
0.04
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 3 0.9243
Stromelysin-1 P08254 MMP3_HUMAN Homo sapiens 3 0.8730
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 3 0.8533
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.8492
Serine/threonine-protein kinase SKY1 Q03656 SKY1_YEAST Saccharomyces cerevisiae 3 0.8395
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.8234
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 3 0.8205
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.8116
Protein ppBat Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron VPI-5482 3 0.8047
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7985
NADPH dehydrogenase 1 Q02899 OYE1_SACPS Saccharomyces pastorianus 3 0.7841
NADPH-dependent 7-cyano-7-deazaguanine reductase Q9KTK0 QUEF_VIBCH Vibrio cholerae serotype O1 3 0.7803
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 3 0.7761
N-alpha-acetyltransferase 50 Q9GZZ1 NAA50_HUMAN Homo sapiens 3 0.7755
Norsolorinic acid synthase Q12053 AFLC_ASPPU Aspergillus parasiticus 3 0.7745
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.7739
Lysozyme C II P11941 LYSC2_ONCMY Oncorhynchus mykiss 3 0.7704
Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 Q9Y3Z3 SAMH1_HUMAN Homo sapiens 3 0.7693
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7599
Alpha-ketoglutarate-dependent dioxygenase FTO Q9C0B1 FTO_HUMAN Homo sapiens 3 0.7599
3'-5' exoribonuclease Rv2179c P9WJ73 EXRBN_MYCTU Mycobacterium tuberculosis 2 0.7588
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7571
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 3 0.7544
Sulfotransferase 1A1 P50225 ST1A1_HUMAN Homo sapiens 3 0.7529
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7521
cAMP-dependent protein kinase type I-alpha regulatory subunit P00514 KAP0_BOVIN Bos taurus 3 0.7495
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.7493
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7483
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 2 0.7469
CCA-adding enzyme O28126 CCA_ARCFU Archaeoglobus fulgidus 2 0.7409
Tyrosine-protein kinase Lck P06239 LCK_HUMAN Homo sapiens 3 0.7382
N-terminal acetyltransferase A complex subunit NAT1 P12945 NAT1_YEAST Saccharomyces cerevisiae 2 0.7344
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 2 0.7339
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7312
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7306
Oxygenase Q194P4 Q194P4_STRAA Streptomyces argillaceus 3 0.7300
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 2 0.7296
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7290
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 2 0.7267
Orotidine 5'-phosphate decarboxylase O26232 PYRF_METTH Methanothermobacter thermautotrophicus 3 0.7263
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 2 0.7263
Metallophosphoesterase A3DJ38 A3DJ38_HUNT2 Clostridium thermocellum 2 0.7252
Disks large homolog 1 Q12959 DLG1_HUMAN Homo sapiens 3 0.7233
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7231
Gag-Pol polyprotein P05896 POL_SIVM1 Simian immunodeficiency virus 3 0.7213
Tyrosine-protein kinase Lck P06239 LCK_HUMAN Homo sapiens 3 0.7212
Aminopeptidase N P15145 AMPN_PIG Sus scrofa 2 0.7209
Gag-Pol polyprotein P03367 POL_HV1BR Human immunodeficiency virus type 1 group M subtype B 3 0.7171
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 2 0.7156
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 2 0.7137
Beta-galactosidase P00722 BGAL_ECOLI Escherichia coli 4 0.7129
Histone deacetylase 4 P56524 HDAC4_HUMAN Homo sapiens 2 0.7123
CCA-adding enzyme O28126 CCA_ARCFU Archaeoglobus fulgidus 2 0.7121
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 2 0.7120
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7114
DNA polymerase III subunit epsilon P03007 DPO3E_ECOLI Escherichia coli 2 0.7114
DNA-directed DNA polymerase Q38087 DPOL_BPR69 Escherichia phage RB69 2 0.7112
cAMP-dependent protein kinase type II-beta regulatory subunit P12369 KAP3_RAT Rattus norvegicus 3 0.7111
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7109
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 3 0.7108
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.7079
Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 Q9Y3Z3 SAMH1_HUMAN Homo sapiens 2 0.7063
ActVA 6 protein Q53908 Q53908_STRCH Streptomyces coelicolor 3 0.7055
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 2 0.7052
Ribonucleoside-diphosphate reductase large chain 1 P21524 RIR1_YEAST Saccharomyces cerevisiae 3 0.7049
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7048
Three-prime repair exonuclease 1 Q91XB0 TREX1_MOUSE Mus musculus 2 0.7032
Albumin P02768 ALBU_HUMAN Homo sapiens 2 0.7021
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.7016
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7009

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