Diplodialide B - Compound Card

Diplodialide B

Select a section from the left sidebar

Diplodialide B

Structure
Zoomed Structure
  • Family: Fungi - Botryosphaeriaceae
  • Kingdom: Fungi
  • Class: Terpenoid
    • Subclass: Monoterpene
Canonical Smiles C[C@@H]1CCC/C=C/[C@H](CC(=O)O1)O
InChI InChI=1S/C10H16O3/c1-8-5-3-2-4-6-9(11)7-10(12)13-8/h4,6,8-9,11H,2-3,5,7H2,1H3/b6-4+/t8-,9-/m1/s1
InChIKey QBMOXZAUNMFTMZ-FVOAXITGSA-N
Formula C10H16O3
HBA 3
HBD 1
MW 184.23
Rotatable Bonds 0
TPSA 46.53
LogP 1.41
Number Rings 1
Number Aromatic Rings 0
Heavy Atom Count 13
Formal Charge 0
Fraction CSP3 0.7
Exact Mass 184.11
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Diplodia sapinea Botryosphaeriaceae Fungi

Showing of synonyms

  • Masi M, Di Lecce R, et al. (2021). Pinofuranoxins A and B, bioactive trisubstituted furanones produced by the invasive pathogen Diplodia sapinea. Journal of natural products, 2021, 84(9), 2600-2605. [View] [PubMed]
Pubchem: 16046710
Nmrshiftdb2: 20182306

No compound-protein relationship available.

Structure

SMILES: O=C1CCC=CCCCCO1

Level: 0

Mol. Weight: 184.23 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.94
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.2
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.83

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.44
Plasma Protein Binding
25.01
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
2.9
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-0.08
Biodegradation
Toxic
Carcinogenesis
Toxic
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
0.65
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
3.72
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-1.69
Rat (Acute)
1.77
Rat (Chronic Oral)
1.86
Fathead Minnow
3.92
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
291.4
Hydration Free Energy
-6.57
Log(D) at pH=7.4
1.13
Log(P)
0.71
Log S
-0.95
Log(Vapor Pressure)
-3.25
Melting Point
63.03
pKa Acid
9.25
pKa Basic
5.68
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 3 0.9703
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 3 0.9158
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 3 0.8984
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.8887
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.8869
Chitinase Q54276 Q54276_SERMA Serratia marcescens 3 0.7822
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7793
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7496
Angiotensin-converting enzyme Q10714 ACE_DROME Drosophila melanogaster 3 0.7492
Adenylate cyclase type 5 P30803 ADCY5_CANLF Canis lupus familiaris 3 0.7355
Adenylate cyclase type 5 P30803 ADCY5_CANLF Canis lupus familiaris 3 0.7345
Regulatory protein SdiA P07026 SDIA_ECOLI Escherichia coli 3 0.7333
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7291
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 2 0.7271
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 2 0.7265
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7263
Muconolactone Delta-isomerase Q8G9L0 Q8G9L0_RHOOP Rhodococcus opacus 2 0.7237
Cytochrome P450 Q93H81 Q93H81_STRAX Streptomyces avermitilis 2 0.7190
Abscisic acid receptor PYL9 Q84MC7 PYL9_ARATH Arabidopsis thaliana 2 0.7163
Methionine aminopeptidase 2 P9WK19 MAP12_MYCTU Mycobacterium tuberculosis 2 0.7105

Download SDF