Diplodialide D - Compound Card

Diplodialide D

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Diplodialide D

Structure
Zoomed Structure
  • Family: Fungi - Botryosphaeriaceae
  • Kingdom: Fungi
  • Class: Terpenoid
    • Subclass: Monoterpene
Canonical Smiles O=C1CCC[C@@H](C)OC(=O)C[C@@H](C1)O
InChI InChI=1S/C10H16O4/c1-7-3-2-4-8(11)5-9(12)6-10(13)14-7/h7,9,12H,2-6H2,1H3/t7-,9-/m1/s1
InChIKey JFKRZDCXAMWXSG-VXNVDRBHSA-N
Formula C10H16O4
HBA 4
HBD 1
MW 200.23
Rotatable Bonds 0
TPSA 63.6
LogP 0.81
Number Rings 1
Number Aromatic Rings 0
Heavy Atom Count 14
Formal Charge 0
Fraction CSP3 0.8
Exact Mass 200.1
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Diplodia sapinea Botryosphaeriaceae Fungi

Showing of synonyms

  • Masi M, Di Lecce R, et al. (2021). Pinofuranoxins A and B, bioactive trisubstituted furanones produced by the invasive pathogen Diplodia sapinea. Journal of natural products, 2021, 84(9), 2600-2605. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O=C1CCCC(=O)OCCCC1

Level: 0

Mol. Weight: 200.23 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.85
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.45
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.61

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.39
Plasma Protein Binding
17.1
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
3.41
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-0.62
Biodegradation
Toxic
Carcinogenesis
Toxic
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
0.9
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
3.83
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-2.11
Rat (Acute)
1.48
Rat (Chronic Oral)
1.87
Fathead Minnow
3.3
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
311.57
Hydration Free Energy
-9.67
Log(D) at pH=7.4
0.05
Log(P)
-0.3
Log S
-0.27
Log(Vapor Pressure)
-4.95
Melting Point
99.26
pKa Acid
8.49
pKa Basic
5.42
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 3 0.9553
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.9544
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.9527
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 3 0.9272
Quorum-sensing transcriptional activator Q8XBD0 Q8XBD0_ECO57 Escherichia coli O157:H7 3 0.9226
Reaction center protein L chain P0C0Y7 RCEH_RHOSH Rhodobacter sphaeroides 3 0.9165
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.8994
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8907
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 3 0.8480
Chitinase Q54276 Q54276_SERMA Serratia marcescens 3 0.7796
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7755
Regulatory protein SdiA P07026 SDIA_ECOLI Escherichia coli 3 0.7569
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 3 0.7502
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 2 0.7370
Transcriptional activator, LuxR/UhpA family of regulators Q7NQP7 Q7NQP7_CHRVO Chromobacterium violaceum 3 0.7357
Adenylate cyclase type 5 P30803 ADCY5_CANLF Canis lupus familiaris 3 0.7279
Avidin P02701 AVID_CHICK Gallus gallus 3 0.7156
Adenylate cyclase type 5 P30803 ADCY5_CANLF Canis lupus familiaris 3 0.7103
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase P19992 HSD_STREX Streptomyces exfoliatus 2 0.7095
Angiotensin-converting enzyme Q10714 ACE_DROME Drosophila melanogaster 3 0.7056
Methionine aminopeptidase 2 P9WK19 MAP12_MYCTU Mycobacterium tuberculosis 2 0.7023

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