2,6-dimethylpyrazine - Compound Card

2,6-dimethylpyrazine

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2,6-dimethylpyrazine

Structure
Zoomed Structure
  • Family: Plantae - Brassicaceae
  • Kingdom: Plantae
  • Class: Pyrazine
Canonical Smiles Cc1cncc(n1)C
InChI InChI=1S/C6H8N2/c1-5-3-7-4-6(2)8-5/h3-4H,1-2H3
InChIKey HJFZAYHYIWGLNL-UHFFFAOYSA-N
Formula C6H8N2
HBA 2
HBD 0
MW 108.14
Rotatable Bonds 0
TPSA 25.78
LogP 1.09
Number Rings 1
Number Aromatic Rings 1
Heavy Atom Count 8
Formal Charge 0
Fraction CSP3 0.33
Exact Mass 108.07
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Brassica oleracea Brassicaceae Plantae 3712

Showing of synonyms

  • Ben Sassi A, Ascrizzi R, et al. (2022). Volatiles, phenolic compounds, antioxidant and antibacterial properties of kohlrabi leaves. Natural product research, 2022, 36(12), 3143-3148. [View] [PubMed]
Pubchem: 7938
Chebi: 89791
Nmrshiftdb2: 20040325
CPRiL: 26639
Structure

SMILES: c1cnccn1

Level: 0

Mol. Weight: 108.14 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-3.95
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-3.3
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-3.26

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.39
Plasma Protein Binding
26.39
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
9.05
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
0.71
Biodegradation
Safe
Carcinogenesis
Toxic
Crustacean
Safe
Liver Injury I (DILI)
Toxic
Eye Corrosion
Toxic
Eye Irritation
Toxic
Maximum Tolerated Dose
0.88
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
2.94
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
2.15
Rat (Acute)
2.09
Rat (Chronic Oral)
1.76
Fathead Minnow
2.96
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
161.53
Hydration Free Energy
-5.58
Log(D) at pH=7.4
0.99
Log(P)
0.57
Log S
0.81
Log(Vapor Pressure)
-0.11
Melting Point
36.25
pKa Acid
12.5
pKa Basic
1.97
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Caspase-7 P55210 CASP7_HUMAN Homo sapiens 3 0.9896
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.9727
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.9657
Casein kinase II subunit alpha P28523 CSK2A_MAIZE Zea mays 3 0.9559
Casein kinase II subunit alpha P28523 CSK2A_MAIZE Zea mays 3 0.9531
Casein kinase II subunit alpha P28523 CSK2A_MAIZE Zea mays 3 0.9499
Casein kinase II subunit alpha P28523 CSK2A_MAIZE Zea mays 3 0.9408
Albumin P02769 ALBU_BOVIN Bos taurus 3 0.9301
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.9254
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.8836
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.8536
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.8511
Alcohol dehydrogenase E chain P00327 ADH1E_HORSE Equus caballus 3 0.8337
Enoyl-[acyl-carrier-protein] reductase [NADH] P9WGR1 INHA_MYCTU Mycobacterium tuberculosis 3 0.8333
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 3 0.8329
UDP-glycosyltransferase 72B1 Q9M156 U72B1_ARATH Arabidopsis thaliana 3 0.8317
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 3 0.8262
Alcohol dehydrogenase E chain P00327 ADH1E_HORSE Equus caballus 3 0.8253
Alcohol dehydrogenase E chain P00327 ADH1E_HORSE Equus caballus 3 0.8207
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8105
Gag-Pol polyprotein P04585 POL_HV1H2 Human immunodeficiency virus type 1 group M subtype B 3 0.8082
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 3 0.8030
Aldo-keto reductase family 1 member B10 O60218 AK1BA_HUMAN Homo sapiens 3 0.8003
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7953
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7921
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 2 0.7782
Nuclear receptor ROR-beta P45446 RORB_RAT Rattus norvegicus 2 0.7736
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7734
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7728
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7717
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 2 0.7710
Thymidine kinase P0DTH5 KITH_HHV11 Human herpesvirus 1 2 0.7710
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7698
Abscisic acid receptor PYR1 O49686 PYR1_ARATH Arabidopsis thaliana 2 0.7686
Carminomycin 4-O-methyltransferase DnrK Q06528 DNRK_STRPE Streptomyces peucetius 2 0.7683
Kynurenine 3-monooxygenase P38169 KMO_YEAST Saccharomyces cerevisiae 2 0.7676
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7673
Prostaglandin reductase 2 Q8N8N7 PTGR2_HUMAN Homo sapiens 2 0.7666
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7635
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7623
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7610
Epoxide hydrolase Q41415 Q41415_SOLTU Solanum tuberosum 2 0.7608
Androgen receptor P10275 ANDR_HUMAN Homo sapiens 2 0.7608
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 2 0.7600
Succinate dehydrogenase flavoprotein subunit P0AC41 SDHA_ECOLI Escherichia coli 2 0.7585
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 2 0.7580
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7557
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7551
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7549
Integrin alpha-L P20701 ITAL_HUMAN Homo sapiens 2 0.7531
Androgen receptor P10275 ANDR_HUMAN Homo sapiens 2 0.7520
Camphor 5-monooxygenase P00183 CPXA_PSEPU Pseudomonas putida 3 0.7492
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7481
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 2 0.7478
Aromatic-amino-acid aminotransferase P95468 TYRB_PARDE Paracoccus denitrificans 2 0.7476
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7454
Progesterone receptor P06401 PRGR_HUMAN Homo sapiens 2 0.7450
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7433
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 2 0.7431
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7430
Aromatic-amino-acid aminotransferase P95468 TYRB_PARDE Paracoccus denitrificans 2 0.7419
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7418
Aldo-keto reductase family 1 member B1 P80276 ALDR_PIG Sus scrofa 3 0.7409
Neocarzinostatin P0A3R9 NCZS_STRCZ Streptomyces carzinostaticus 2 0.7409
2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase Q84HC8 NCSB1_STRCZ Streptomyces carzinostaticus 2 0.7404
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7395
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7392
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7381
Corticosteroid-binding globulin P08185 CBG_HUMAN Homo sapiens 2 0.7374
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 2 0.7369
Aldo-keto reductase family 1 member B10 O60218 AK1BA_HUMAN Homo sapiens 2 0.7341
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 2 0.7337
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 2 0.7337
Aromatase P11511 CP19A_HUMAN Homo sapiens 2 0.7332
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 2 0.7319
Soluble cytochrome b562 P0ABE7 C562_ECOLX Escherichia coli 2 0.7306
Glutathione S-transferase P P09211 GSTP1_HUMAN Homo sapiens 2 0.7266
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7258
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7254
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 2 0.7252
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7247
Aryl hydrocarbon receptor nuclear translocator P53762 ARNT_MOUSE Mus musculus 3 0.7237
Gastrotropin Q6IMW5 Q6IMW5_DANRE Danio rerio 2 0.7237
Cytochrome P450 2A6 P11509 CP2A6_HUMAN Homo sapiens 2 0.7235
Trichosurin Q29147 TRIC_TRIVU Trichosurus vulpecula 2 0.7229
Nuclear receptor subfamily 1 group I member 3 O35627 NR1I3_MOUSE Mus musculus 2 0.7220
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 2 0.7215
Albumin P02768 ALBU_HUMAN Homo sapiens 2 0.7213
Albumin P02768 ALBU_HUMAN Homo sapiens 2 0.7210
Androgen receptor P10275 ANDR_HUMAN Homo sapiens 2 0.7179
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 2 0.7175
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7170
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7158
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 2 0.7120
Gag-Pol polyprotein P03366 POL_HV1B1 Human immunodeficiency virus type 1 group M subtype B 2 0.7112
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7102
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7102
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 2 0.7094
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 2 0.7071
Squalene synthase P37268 FDFT_HUMAN Homo sapiens 3 0.7061
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7048
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7046
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7039
Steroid 21-hydroxylase P08686 CP21A_HUMAN Homo sapiens 2 0.7039
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 2 0.7028
Thiamine-phosphate synthase P39594 THIE_BACSU Bacillus subtilis 2 0.7018
Aldo-keto reductase family 1 member B1 P80276 ALDR_PIG Sus scrofa 3 0.7015

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