Isorhamnetin 3,4'-di-O-beta-glucoside - Compound Card

Isorhamnetin 3,4'-di-O-beta-glucoside

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Isorhamnetin 3,4'-di-O-beta-glucoside

Structure
Zoomed Structure
  • Family: Plantae - Brassicaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavonol Glycoside
Canonical Smiles OC[C@@H]1O[C@H](Oc2ccc(cc2OC)c2oc3cc(O)cc(c3c(=O)c2O[C@@H]2O[C@H](CO)[C@H]([C@@H]([C@H]2O)O)O)O)[C@H]([C@@H]([C@H]1O)O)O
InChI InChI=1S/C28H32O17/c1-40-13-4-9(2-3-12(13)42-27-23(38)21(36)18(33)15(7-29)43-27)25-26(20(35)17-11(32)5-10(31)6-14(17)41-25)45-28-24(39)22(37)19(34)16(8-30)44-28/h2-6,15-16,18-19,21-24,27-34,36-39H,7-8H2,1H3/t15-,16+,18-,19+,21+,22-,23-,24+,27-,28-/m0/s1
InChIKey VKVBSQRURLRCHO-NPVDYQLWSA-N
Formula C28H32O17
HBA 17
HBD 10
MW 640.55
Rotatable Bonds 8
TPSA 278.66
LogP -2.76
Number Rings 5
Number Aromatic Rings 3
Heavy Atom Count 45
Formal Charge 0
Fraction CSP3 0.46
Exact Mass 640.16
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Diplotaxis harra Brassicaceae Plantae 308281

Showing of synonyms

  • Kassem M.E, Afifi M.S, et al. (2013). Two new flavonol glycosides and biological activities of Diplotaxis harra (Forssk.) Boiss. Natural product research, 2013, 27(24), 2272-80. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1Oc(c2=O)c(oc(c23)cccc3)-c4ccc(cc4)OC5CCCCO5

Level: 3

Mol. Weight: 640.55 g/mol

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccc(cc3)OC4CCCCO4

Level: 2

Mol. Weight: 640.55 g/mol

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)OC4CCCCO4

Level: 2

Mol. Weight: 640.55 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)OC3CCCCO3

Level: 1

Mol. Weight: 640.55 g/mol

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccccc3

Level: 1

Mol. Weight: 640.55 g/mol

Structure

SMILES: c1ccccc1OC2CCCCO2

Level: 1

Mol. Weight: 640.55 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 640.55 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 640.55 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 640.55 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.63
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.270
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
23.75

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.790
Plasma Protein Binding
69.87
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
8.160
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-3.840
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.900
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.030
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-39559.660
Rat (Acute)
2.340
Rat (Chronic Oral)
4.920
Fathead Minnow
66.930
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
393.100
Hydration Free Energy
-2.920
Log(D) at pH=7.4
-1.040
Log(P)
-1.8
Log S
-4.15
Log(Vapor Pressure)
-21.79
Melting Point
244.25
pKa Acid
3.2
pKa Basic
5.99
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.8864
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8848
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8847
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8646
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8635
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8269
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.8234
Purine nucleoside phosphorylase DeoD-type P0ABP8 DEOD_ECOLI Escherichia coli 3 0.8021
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.7814
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7781
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7720
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7716
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7673
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7647
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7644
Beta-galactosidase P00722 BGAL_ECOLI Escherichia coli 4 0.7633
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.7464
Dihydrofolate reductase P0A017 DYR_STAAU Staphylococcus aureus 4 0.7373
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7344
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7328
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7313
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.7301
Avidin P02701 AVID_CHICK Gallus gallus 3 0.7241
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7090
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.7063
3-phosphoinositide-dependent protein kinase 1 O15530 PDPK1_HUMAN Homo sapiens 3 0.7049
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 3 0.7030
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7017

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