Wikstrol A - Compound Card

Wikstrol A

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Wikstrol A

Structure
Zoomed Structure
  • Family: Plantae - Caryophyllaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Biflavonoid
Canonical Smiles Oc1ccc(cc1)[C@H]1Oc2c(C[C@@H]1O)c(O)cc(c2c1c(oc2c(c1=O)c(O)cc(c2)O)c1ccc(cc1)O)O
InChI InChI=1S/C30H22O10/c31-15-5-1-13(2-6-15)28-22(37)11-18-19(34)12-21(36)25(30(18)40-28)26-27(38)24-20(35)9-17(33)10-23(24)39-29(26)14-3-7-16(32)8-4-14/h1-10,12,22,28,31-37H,11H2/t22-,28+/m0/s1
InChIKey SRCSHETVEHQXLC-RBISFHTESA-N
Formula C30H22O10
HBA 10
HBD 7
MW 542.5
Rotatable Bonds 3
TPSA 181.05
LogP 4.4
Number Rings 6
Number Aromatic Rings 5
Heavy Atom Count 40
Formal Charge 0
Fraction CSP3 0.1
Exact Mass 542.12
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Gymnocarpos decandrus Caryophyllaceae Plantae 157629

Showing of synonyms

  • Fathy H. (2021). Polyphenolics from Gymnocarpos decandrus Forssk roots and their biological activities. Natural product research, 2021, 35(5), 858-862. [View] [PubMed]
Pubchem: 5481857
Nmrshiftdb2: 70005003

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)-c4cccc(c45)CCC(O5)c6ccccc6

Level: 3

Mol. Weight: 542.5 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)-c3cccc(c34)CCC(O4)c5ccccc5

Level: 2

Mol. Weight: 542.5 g/mol

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)-c4cccc(c45)CCCO5

Level: 2

Mol. Weight: 542.5 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)-c3cccc(c34)CCCO4

Level: 1

Mol. Weight: 542.5 g/mol

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccccc3

Level: 1

Mol. Weight: 542.5 g/mol

Structure

SMILES: c1cccc(c12)OC(CC2)c3ccccc3

Level: 1

Mol. Weight: 542.5 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 542.5 g/mol

Structure

SMILES: C1CCOc(c12)cccc2

Level: 0

Mol. Weight: 542.5 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 542.5 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.12
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.300
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
5.8

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
1.190
Plasma Protein Binding
93.33
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
7.450
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.620
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
1.250
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
6.220
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Toxic
NR-ER
Toxic
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-5491.080
Rat (Acute)
2.370
Rat (Chronic Oral)
3.590
Fathead Minnow
18.780
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Toxic

General Properties

Boiling Point
594.510
Hydration Free Energy
-3.130
Log(D) at pH=7.4
2.970
Log(P)
4.78
Log S
-5.39
Log(Vapor Pressure)
-9.18
Melting Point
310.38
pKa Acid
8.14
pKa Basic
6.92
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Multidrug-efflux transporter 1 regulator P39075 BMRR_BACSU Bacillus subtilis 3 0.9038
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8828
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.8828
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.8758
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8587
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.8525
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.8459
Nodulin-13 P93330 NOD13_MEDTR Medicago truncatula 3 0.8454
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 3 0.8371
Biotin carboxylase P24182 ACCC_ECOLI Escherichia coli 5 0.8322
Maltose/maltodextrin-binding periplasmic protein P0AEX9 MALE_ECOLI Escherichia coli 3 0.8180
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 3 0.8012
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.7787
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 4 0.7785
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7660
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Q04631 FNTA_RAT Rattus norvegicus 3 0.7654
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7592
Protease O38896 O38896_9HIV1 Human immunodeficiency virus 1 3 0.7585
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7497
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.7495
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 3 0.7476
Seminal ribonuclease P00669 RNS_BOVIN Bos taurus 3 0.7461
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 3 0.7454
HTH-type transcriptional regulator QacR P0A0N4 QACR_STAAU Staphylococcus aureus 3 0.7439
Biotin carboxylase P24182 ACCC_ECOLI Escherichia coli 4 0.7438
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7436
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 3 0.7352
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7260
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.7207
Biotin carboxylase P24182 ACCC_ECOLI Escherichia coli 4 0.7168
DNA gyrase subunit A P0AES5 GYRA_SHIFL Shigella flexneri 3 0.7158
Dihydrofolate reductase P22906 DYR_CANAX Candida albicans 4 0.7114
Ras-related protein Ral-B P11234 RALB_HUMAN Homo sapiens 3 0.7107
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 4 0.7085
Genome polyprotein Q2YHF0 POLG_DEN4T Dengue virus type 4 3 0.7076
Ephrin type-B receptor 2 P54763 EPHB2_MOUSE Mus musculus 3 0.7049
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Q4WP27 Q4WP27_ASPFU Aspergillus fumigatus 3 0.7031

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