Atrisemibaccatoside A - Compound Card

Atrisemibaccatoside A

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Atrisemibaccatoside A

Structure
Zoomed Structure
  • Family: Plantae - Chenopodiaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavonol Triglycoside
Canonical Smiles OC[C@H]1OC([C@@H]([C@H]1O)O)O[C@@H]1[C@H](O)C(OC[C@H]2O[C@@H](Oc3c(oc4c(c3=O)c(O)cc(c4)O)c3ccc(c(c3)OC)O)[C@@H]([C@H]([C@@H]2O)O)O)O[C@@H]([C@H]1O)C
InChI InChI=1S/C33H40O20/c1-10-20(38)29(52-32-25(43)21(39)17(8-34)50-32)27(45)31(48-10)47-9-18-22(40)24(42)26(44)33(51-18)53-30-23(41)19-14(37)6-12(35)7-16(19)49-28(30)11-3-4-13(36)15(5-11)46-2/h3-7,10,17-18,20-22,24-27,29,31-40,42-45H,8-9H2,1-2H3/t10-,17-,18-,20-,21+,22-,24+,25-,26-,27+,29+,31?,32?,33+/m1/s1
InChIKey HXCBAFYNILFOMA-FRLZAUQLSA-N
Formula C33H40O20
HBA 20
HBD 11
MW 756.66
Rotatable Bonds 10
TPSA 317.35
LogP -2.92
Number Rings 6
Number Aromatic Rings 3
Heavy Atom Count 53
Formal Charge 0
Fraction CSP3 0.55
Exact Mass 756.21
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Atriplex semibaccata Chenopodiaceae Plantae 417609

Showing of synonyms

  • Elshamy A, Mohamed T, et al. (2019). New phenolics, cytotoxicity and chemosystematic significance of Atriplex semibaccata. Phytochemistry Letters, 2019, 34, 74-78. [View]

No compound-protein relationship available.

Structure

SMILES: O1CCCC1OC2CC(OCC2)OCC3CCCC(O3)Oc(c4=O)c(-c5ccccc5)oc(c46)cccc6

Level: 4

Mol. Weight: 756.66 g/mol

Structure

SMILES: O1CCCC1OC2CC(OCC2)OCC3CCCC(O3)Oc(c4=O)coc(c45)cccc5

Level: 3

Mol. Weight: 756.66 g/mol

Structure

SMILES: O1CCCCC1OCC2CCCC(O2)Oc(c3=O)c(-c4ccccc4)oc(c35)cccc5

Level: 3

Mol. Weight: 756.66 g/mol

Structure

SMILES: O1CCCCC1OCC2CCCC(O2)Oc(c3=O)coc(c34)cccc4

Level: 2

Mol. Weight: 756.66 g/mol

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)OC4CCCCO4

Level: 2

Mol. Weight: 756.66 g/mol

Structure

SMILES: O1CCCCC1COC(OCC2)CC2OC3CCCO3

Level: 2

Mol. Weight: 756.66 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)OC3CCCCO3

Level: 1

Mol. Weight: 756.66 g/mol

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccccc3

Level: 1

Mol. Weight: 756.66 g/mol

Structure

SMILES: O1CCCCC1COC2CCCCO2

Level: 1

Mol. Weight: 756.66 g/mol

Structure

SMILES: O1CCCC1OC2CCOCC2

Level: 1

Mol. Weight: 756.66 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 756.66 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 756.66 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 756.66 g/mol

Structure

SMILES: C1CCOC1

Level: 0

Mol. Weight: 756.66 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.61
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
2.620
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
1172.5

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.750
Plasma Protein Binding
50.18
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
9.430
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-26.420
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.680
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
6.790
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-2123722.430
Rat (Acute)
2.390
Rat (Chronic Oral)
4.680
Fathead Minnow
2687.950
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
232071.920
Hydration Free Energy
-2.920
Log(D) at pH=7.4
-0.800
Log(P)
-1.09
Log S
-4.9
Log(Vapor Pressure)
-7610.35
Melting Point
214.73
pKa Acid
-22.48
pKa Basic
4.9
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.9599
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.9110
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 3 0.9085
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.9075
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8884
tyrosine--tRNA ligase Q4QFJ7 Q4QFJ7_LEIMA Leishmania major 4 0.8834
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8791
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8581
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8433
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8415
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.8358
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 3 0.8173
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.8150
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8043
Lactoperoxidase A0A452E9Y6 PERL_CAPHI Capra hircus 3 0.8038
Purine nucleoside phosphorylase DeoD-type P0ABP8 DEOD_ECOLI Escherichia coli 3 0.8021
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7900
Hypoxanthine phosphoribosyltransferase Q4DRC4 Q4DRC4_TRYCC Trypanosoma cruzi 3 0.7900
Cytochrome P450 1A1 P04798 CP1A1_HUMAN Homo sapiens 3 0.7894
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7885
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.7883
Anthocyanidin 3-O-glucosyltransferase UFGT P51094 UFOG_VITVI Vitis vinifera 4 0.7850
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7794
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 4 0.7751
Streptogramin A acetyltransferase P50870 VATD_ENTFC Enterococcus faecium 3 0.7741
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 4 0.7737
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7729
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7669
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 5 0.7627
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7577
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.7503
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7499
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.7431
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7396
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7250
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha P49354 FNTA_HUMAN Homo sapiens 3 0.7247
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 2 0.7219
ATP synthase subunit alpha, mitochondrial P19483 ATPA_BOVIN Bos taurus 3 0.7193
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.7163
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 3 0.7147
Serine/threonine-protein kinase PLK1 P53350 PLK1_HUMAN Homo sapiens 3 0.7137
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7114
3-phosphoinositide-dependent protein kinase 1 O15530 PDPK1_HUMAN Homo sapiens 3 0.7089
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7040
Thermolysin P00800 THER_BACTH Bacillus thermoproteolyticus 2 0.7021
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7010
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7004
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7004

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