Naringin7-O- glucoside - Compound Card

Naringin7-O- glucoside

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Naringin7-O- glucoside

Structure
Zoomed Structure
  • Family: Plantae - Rutaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavonoid Glycoside
Canonical Smiles OC[C@H]1O[C@@H](Oc2cc3O[C@@H](CC(=O)c3c(c2)O)c2ccc(cc2)O)[C@@H]([C@H]([C@@H]1O)O)O
InChI InChI=1S/C21H22O10/c22-8-16-18(26)19(27)20(28)21(31-16)29-11-5-12(24)17-13(25)7-14(30-15(17)6-11)9-1-3-10(23)4-2-9/h1-6,14,16,18-24,26-28H,7-8H2/t14-,16+,18+,19-,20+,21+/m0/s1
InChIKey DLIKSSGEMUFQOK-SFTVRKLSSA-N
Formula C21H22O10
HBA 10
HBD 6
MW 434.4
Rotatable Bonds 4
TPSA 166.14
LogP -0.02
Number Rings 4
Number Aromatic Rings 2
Heavy Atom Count 31
Formal Charge 0
Fraction CSP3 0.38
Exact Mass 434.12
Number of Lipinski Rule Violations 1
# Species Family Kingdom NCBI Taxonomy ID
1 Convolvulus althaeoides Convolvulaceae Plantae 267570
2 Citrus nobilis x Citrus deliciosa Rutaceae Plantae 558547

Showing of synonyms

  • Hrichi S, Chaabane-Banaoues R, et al. (2020). Effect of seasonal variation on the chemical composition and antioxidant and antifungal activities of Convolvulus althaeoides L. leaf extract. Arabian Journal of Chemistry, 2020, 13(6), 5651-5668. [View]
  • El-Hawary S.S, Issa M.Y, et al. (2022). Potential of (Citrus nobilis Lour x Citrus deliciosa Tenora) metabolites on COVID-19 virus main protease supported by in silico analysis. Natural product research, 2022, 36(11), 2843-2847. [View] [PubMed]
Pubchem: 92794
Kegg Ligand: C09099
Chebi: 28327
Nmrshiftdb2: 60021910
Metabolights: MTBLC28327
Bindingdb: 50249470
CPRiL: 76207
Structure

SMILES: c1ccccc1C(CC2=O)Oc(c23)cc(cc3)OC4CCCCO4

Level: 2

Mol. Weight: 434.4 g/mol

Structure

SMILES: O=C1CCOc(c12)cc(cc2)OC3CCCCO3

Level: 1

Mol. Weight: 434.4 g/mol

Structure

SMILES: c1cccc(c12)OC(CC2=O)c3ccccc3

Level: 1

Mol. Weight: 434.4 g/mol

Structure

SMILES: c1cccc(c12)OCCC2=O

Level: 0

Mol. Weight: 434.4 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 434.4 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 434.4 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.83
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.230
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-0.39

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.880
Plasma Protein Binding
82.03
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
12.880
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-2.410
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.670
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
4.670
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-51.090
Rat (Acute)
2.380
Rat (Chronic Oral)
3.820
Fathead Minnow
4.180
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
551.870
Hydration Free Energy
-5.500
Log(D) at pH=7.4
0.760
Log(P)
0.09
Log S
-3.81
Log(Vapor Pressure)
-12.66
Melting Point
202.7
pKa Acid
5.22
pKa Basic
6.79
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.9368
Histone deacetylase 4 P56524 HDAC4_HUMAN Homo sapiens 3 0.9336
Flavoredoxin Q72HI0 Q72HI0_THET2 Thermus thermophilus 3 0.9249
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 4 0.8869
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 3 0.8745
Heat shock protein HSP 90-beta P08238 HS90B_HUMAN Homo sapiens 3 0.8655
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.8534
Pantothenate synthetase P9WIL5 PANC_MYCTU Mycobacterium tuberculosis 3 0.8514
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8410
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.8299
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8292
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 3 0.8186
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 4 0.8167
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 4 0.8130
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 3 0.8072
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 4 0.8059
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8045
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 4 0.8036
Purine nucleoside phosphorylase DeoD-type P0ABP9 DEOD_ECO57 Escherichia coli O157:H7 3 0.7935
Anthocyanidin 3-O-glucosyltransferase UFGT P51094 UFOG_VITVI Vitis vinifera 4 0.7931
Valacyclovir hydrolase Q86WA6 BPHL_HUMAN Homo sapiens 3 0.7901
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.7884
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 4 0.7880
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7852
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 4 0.7851
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.7846
Peroxisome proliferator-activated receptor gamma P37231 PPARG_HUMAN Homo sapiens 4 0.7839
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 4 0.7833
Serine/threonine-protein kinase 10 O94804 STK10_HUMAN Homo sapiens 3 0.7784
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7768
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 3 0.7709
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7689
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.7638
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7615
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 5 0.7586
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7563
TetR family transcriptional regulator Q58L87 Q58L87_MYCSM Mycolicibacterium smegmatis 3 0.7560
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.7560
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 4 0.7550
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.7499
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.7483
Threonine--tRNA ligase P0A8M3 SYT_ECOLI Escherichia coli 3 0.7475
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 4 0.7450
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7447
5-methylthioadenosine/S-adenosylhomocysteine deaminase Q7NZ90 Q7NZ90_CHRVO Chromobacterium violaceum 3 0.7435
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7415
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 5 0.7407
Neprilysin P08049 NEP_RABIT Oryctolagus cuniculus 4 0.7389
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7360
Fibroblast growth factor receptor 1 P11362 FGFR1_HUMAN Homo sapiens 3 0.7353
Kinesin-like protein KIF11 P52732 KIF11_HUMAN Homo sapiens 3 0.7318
Poly [ADP-ribose] polymerase tankyrase-2 Q9H2K2 TNKS2_HUMAN Homo sapiens 4 0.7315
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7274
Transthyretin Q9PTT3 Q9PTT3_SPAAU Sparus aurata 3 0.7214
Myosin heavy chain, striated muscle P24733 MYS_ARGIR Argopecten irradians 3 0.7182
Acyl-CoA:acyl-CoA alkyltransferase Q8PDX2 OLEA_XANCP Xanthomonas campestris pv. campestris 3 0.7181
4-hydroxyphenylacetate 3-monooxygenase Q8YHT7 Q8YHT7_BRUME Brucella melitensis biotype 1 2 0.7179
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7132
Cytosolic purine 5'-nucleotidase P49902 5NTC_HUMAN Homo sapiens 2 0.7132
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 2 0.7130
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.7130
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.7115
Biotin carboxylase P24182 ACCC_ECOLI Escherichia coli 3 0.7111
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7109
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 3 0.7099
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7080
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 2 0.7072
Transthyretin P02767 TTHY_RAT Rattus norvegicus 2 0.7052
YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein Q5SHN1 Q5SHN1_THET8 Thermus thermophilus 3 0.7051
Ribonuclease J H9CZL7 H9CZL7_DEIRD Deinococcus radiodurans 3 0.7013
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7007

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