Echinenone - Compound Card

Echinenone

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Echinenone

Structure
Zoomed Structure
  • Family: Plantae - Convolvulaceae
  • Kingdom: Plantae
  • Class: Carotenoid
Canonical Smiles C/C(=C\C=C\C=C(\C=C\C=C(\C=C\C1=C(C)C(=O)CCC1(C)C)/C)/C)/C=C/C=C(/C=C/C1=C(C)CCCC1(C)C)\C
InChI InChI=1S/C40H54O/c1-30(18-13-20-32(3)23-25-36-34(5)22-15-28-39(36,7)8)16-11-12-17-31(2)19-14-21-33(4)24-26-37-35(6)38(41)27-29-40(37,9)10/h11-14,16-21,23-26H,15,22,27-29H2,1-10H3/b12-11+,18-13+,19-14+,25-23+,26-24+,30-16+,31-17+,32-20+,33-21+
InChIKey QXNWZXMBUKUYMD-QQGJMDNJSA-N
Formula C40H54O
HBA 1
HBD 0
MW 550.87
Rotatable Bonds 10
TPSA 17.07
LogP 11.78
Number Rings 2
Number Aromatic Rings 0
Heavy Atom Count 41
Formal Charge 0
Fraction CSP3 0.42
Exact Mass 550.42
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Convolvulus althaeoides Convolvulaceae Plantae 267570

Showing of synonyms

  • Hrichi S, Chaabane-Banaoues R, et al. (2020). Effect of seasonal variation on the chemical composition and antioxidant and antifungal activities of Convolvulus althaeoides L. leaf extract. Arabian Journal of Chemistry, 2020, 13(6), 5651-5668. [View]
Pubchem: 5281236
Kegg Ligand: C08592
Chebi: 4746
Nmrshiftdb2: 60065158
Metabolights: MTBLC4746
Pdb Ligand: ECH
CPRiL: 156523
Structure

SMILES: C1CCC(=O)C=C1C=CC=CC=CC=CC=CC=CC=CC=CC=CC2=CCCCC2

Level: 1

Mol. Weight: 550.87 g/mol

Structure

SMILES: O=C1C=CCCC1

Level: 0

Mol. Weight: 550.87 g/mol

Structure

SMILES: C1=CCCCC1

Level: 0

Mol. Weight: 550.87 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.58
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.86
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-2.38

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
2.73
Plasma Protein Binding
88.53
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
-2.27
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
2.52
Biodegradation
Safe
Carcinogenesis
Toxic
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.51
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
7.38
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Toxic
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-2063.47
Rat (Acute)
2.76
Rat (Chronic Oral)
2.46
Fathead Minnow
15.71
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Toxic
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
483.67
Hydration Free Energy
-3.02
Log(D) at pH=7.4
6.13
Log(P)
11.13
Log S
-7.61
Log(Vapor Pressure)
-7.2
Melting Point
176.23
pKa Acid
15.72
pKa Basic
5.48
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Beta-lactoglobulin P02754 LACB_BOVIN Bos taurus 3 0.9632
Beta-lactoglobulin P02754 LACB_BOVIN Bos taurus 3 0.9397
Vitamin D(3) 25-hydroxylase C4B644 CPVDH_PSEAH Pseudonocardia autotrophica 3 0.9279
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8997
Bacteriorhodopsin P02945 BACR_HALSA Halobacterium salinarum 3 0.8981
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8869
Retinol-binding protein 1 P02696 RET1_RAT Rattus norvegicus 3 0.8840
Rhodopsin P02699 OPSD_BOVIN Bos taurus 3 0.8787
Cartilage oligomeric matrix protein P35444 COMP_RAT Rattus norvegicus 3 0.8703
Beta-lactoglobulin P02754 LACB_BOVIN Bos taurus 3 0.8683
Retinol dehydratase Q26490 Q26490_SPOFR Spodoptera frugiperda 3 0.8534
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.8283
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.8232
Retinol-binding protein 2 P50120 RET2_HUMAN Homo sapiens 3 0.8226
Cholesterol side-chain cleavage enzyme, mitochondrial P05108 CP11A_HUMAN Homo sapiens 3 0.8100
ADP-ribosylation factor 1 P84077 ARF1_HUMAN Homo sapiens 2 0.8066
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 3 0.8008
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7868
Abscisic acid receptor PYR1 O49686 PYR1_ARATH Arabidopsis thaliana 3 0.7856
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7829
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7814
Rhodopsin P02699 OPSD_BOVIN Bos taurus 3 0.7783
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 2 0.7718
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 2 0.7709
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7709
Putative cytochrome P450 120 Q59990 CP120_SYNY3 Synechocystis sp 3 0.7706
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 2 0.7701
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 3 0.7682
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7661
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 2 0.7660
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7649
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 2 0.7609
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7579
Fatty acid-binding protein 10-A, liver basic Q9I8L5 FA10A_DANRE Danio rerio 2 0.7553
Oxysterols receptor LXR-beta P55055 NR1H2_HUMAN Homo sapiens 3 0.7542
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7535
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7532
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7513
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7508
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 2 0.7488
Retinaldehyde-binding protein 1 P12271 RLBP1_HUMAN Homo sapiens 3 0.7472
Nuclear receptor ROR-alpha P35398 RORA_HUMAN Homo sapiens 3 0.7454
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7454
Retinol-binding protein 2 P06768 RET2_RAT Rattus norvegicus 3 0.7450
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7443
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 3 0.7402
Japanin M1MR49 M1MR49_RHIAP Rhipicephalus appendiculatus 3 0.7393
Nuclear receptor ROR-beta P45446 RORB_RAT Rattus norvegicus 2 0.7392
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7378
Retinoic acid receptor gamma P13631 RARG_HUMAN Homo sapiens 3 0.7356
Retinol-binding protein 4 P02753 RET4_HUMAN Homo sapiens 3 0.7355
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 2 0.7343
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7333
Retinoic acid receptor beta P10826 RARB_HUMAN Homo sapiens 3 0.7325
Peroxisome proliferator-activated receptor gamma P37231 PPARG_HUMAN Homo sapiens 2 0.7310
Retinol-binding protein 4 P18902 RET4_BOVIN Bos taurus 3 0.7305
Retinol-binding protein 4 P18902 RET4_BOVIN Bos taurus 3 0.7302
Corticosteroid-binding globulin P08185 CBG_HUMAN Homo sapiens 2 0.7297
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7290
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 2 0.7272
Beta-elicitin cryptogein P15570 ELIB_PHYCR Phytophthora cryptogea 3 0.7269
Retinol-binding protein 4 P18902 RET4_BOVIN Bos taurus 3 0.7266
Retinol-binding protein 4 P18902 RET4_BOVIN Bos taurus 3 0.7264
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7262
Albumin P02768 ALBU_HUMAN Homo sapiens 2 0.7232
4,4'-diapophytoene synthase A9JQL9 CRTM_STAAU Staphylococcus aureus 2 0.7219
Chloramphenicol acetyltransferase P62577 CAT_ECOLX Escherichia coli 3 0.7216
NPC intracellular cholesterol transporter 1 O15118 NPC1_HUMAN Homo sapiens 3 0.7212
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7202
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 2 0.7194
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7172
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7161
Retinol-binding protein 4 P18902 RET4_BOVIN Bos taurus 3 0.7152
Retinol-binding protein 1 P09455 RET1_HUMAN Homo sapiens 3 0.7146
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7134
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7132
Nuclear receptor subfamily 1 group I member 3 O35627 NR1I3_MOUSE Mus musculus 2 0.7118
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7116
Protein BRASSINOSTEROID INSENSITIVE 1 O22476 BRI1_ARATH Arabidopsis thaliana 3 0.7098
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7096
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7093
Genome polyprotein O92972 POLG_HCVJ4 Hepatitis C virus genotype 1b 2 0.7091
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7084
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7081
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 3 0.7078
Retinol-binding protein 4 P18902 RET4_BOVIN Bos taurus 3 0.7078
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7069
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7066
Abscisic acid receptor PYL10 Q8H1R0 PYL10_ARATH Arabidopsis thaliana 3 0.7062
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7045
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 2 0.7040
Endoplasmin, putative Q8I0V4 Q8I0V4_PLAF7 Plasmodium falciparum 3 0.7034
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7015
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7011
Avidin P02701 AVID_CHICK Gallus gallus 2 0.7002

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