Dorycnic acid - Compound Card

Dorycnic acid

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Dorycnic acid

Structure
Zoomed Structure
  • Family: Plantae - Convolvulaceae
  • Kingdom: Plantae
  • Class: Phenolic
    • Subclass: Phenolic Acid
Canonical Smiles CCCCO[C@@H]1[C@H](OC(=O)/C=C/c2ccc(c(c2)O)O)C[C@@]1(O)[C@@H](CC(=O)O)O
InChI InChI=1S/C20H26O9/c1-2-3-8-28-19-15(11-20(19,27)16(23)10-17(24)25)29-18(26)7-5-12-4-6-13(21)14(22)9-12/h4-7,9,15-16,19,21-23,27H,2-3,8,10-11H2,1H3,(H,24,25)/b7-5+/t15-,16-,19-,20-/m1/s1
InChIKey JLQVVYXIVAEDIW-HBOIHNFSSA-N
Formula C20H26O9
HBA 8
HBD 5
MW 410.42
Rotatable Bonds 10
TPSA 153.75
LogP 1.18
Number Rings 2
Number Aromatic Rings 1
Heavy Atom Count 29
Formal Charge 0
Fraction CSP3 0.5
Exact Mass 410.16
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Convolvulus dorycnium Convolvulaceae Plantae 267580

Showing of synonyms

  • Nacef S, Jannet H, et al. (2010). Phenolic constituents of Convolvulus dorycnium L. flowers. Phytochemistry Letters, 2010, 3(2), 66-69. [View]
Pubchem: 162844177

No compound-protein relationship available.

Structure

SMILES: C1CCC1OC(=O)C=Cc2ccccc2

Level: 1

Mol. Weight: 410.42 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 410.42 g/mol

Structure

SMILES: C1CCC1

Level: 0

Mol. Weight: 410.42 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.35
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.64
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-3.53

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.52
Plasma Protein Binding
82.75
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
7.85
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-1.2
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.16
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
3.76
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-0.52
Rat (Acute)
2.09
Rat (Chronic Oral)
2.95
Fathead Minnow
3.78
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
454.3
Hydration Free Energy
-9.18
Log(D) at pH=7.4
-0.55
Log(P)
1.16
Log S
-2.36
Log(Vapor Pressure)
-12.88
Melting Point
170.47
pKa Acid
4.13
pKa Basic
6.31
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.9351
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.9123
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.9105
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.9092
Valacyclovir hydrolase Q86WA6 BPHL_HUMAN Homo sapiens 3 0.9035
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.8881
2-dehydro-3-deoxyphosphooctonate aldolase P0A715 KDSA_ECOLI Escherichia coli 3 0.8781
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 3 0.8685
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.8684
Mexicain P84346 MEX1_JACME Jacaratia mexicana 3 0.8680
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8655
Coagulation factor X P00742 FA10_HUMAN Homo sapiens 3 0.8493
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.8490
2-aminohexano-6-lactam racemase Q7M181 ACLR_ACHOB Achromobacter obae 3 0.8424
Caffeic acid O-methyltransferase Q9ZTU2 Q9ZTU2_LOLPR Lolium perenne 4 0.8373
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8366
Aspartate carbamoyltransferase catalytic subunit P0A786 PYRB_ECOLI Escherichia coli 3 0.8345
Phenylalanine-4-hydroxylase P00439 PH4H_HUMAN Homo sapiens 3 0.8342
Purine nucleoside phosphorylase P00491 PNPH_HUMAN Homo sapiens 3 0.8307
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.8265
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.8262
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8231
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 3 0.8213
Bis(5'-adenosyl)-triphosphatase P49789 FHIT_HUMAN Homo sapiens 3 0.8191
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.8187
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.8132
Dual specificity mitogen-activated protein kinase kinase 1 Q02750 MP2K1_HUMAN Homo sapiens 3 0.8082
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.8056
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 3 0.8050
Formate--tetrahydrofolate ligase P21164 FTHS_MOOTH Moorella thermoacetica 3 0.8024
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 2 0.8003
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 4 0.7993
Ras-related protein Ral-B P11234 RALB_HUMAN Homo sapiens 3 0.7966
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7940
Purine nucleoside phosphorylase P00491 PNPH_HUMAN Homo sapiens 3 0.7922
Pantothenate synthetase P9WIL5 PANC_MYCTU Mycobacterium tuberculosis 3 0.7921
Genome polyprotein P26663 POLG_HCVBK Hepatitis C virus genotype 1b 4 0.7918
Kinesin-like protein KIF11 P52732 KIF11_HUMAN Homo sapiens 3 0.7898
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.7789
cAMP-dependent protein kinase catalytic subunit alpha P00517 KAPCA_BOVIN Bos taurus 3 0.7786
Ribonuclease J H9CZL7 H9CZL7_DEIRD Deinococcus radiodurans 3 0.7774
Ectonucleoside triphosphate diphosphohydrolase I Q5ZUA2 Q5ZUA2_LEGPH Legionella pneumophila subsp. pneumophila 3 0.7772
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.7769
Tyrosine-protein kinase JAK3 P52333 JAK3_HUMAN Homo sapiens 3 0.7756
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.7740
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7725
Thymidine phosphorylase Q7CP66 TYPH_SALTY Salmonella typhimurium 3 0.7693
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.7681
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.7610
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta P78356 PI42B_HUMAN Homo sapiens 3 0.7597
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7542
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7497
Dual specificity mitogen-activated protein kinase kinase 1 Q02750 MP2K1_HUMAN Homo sapiens 3 0.7453
Ribosomal RNA small subunit methyltransferase Nep1 Q57977 NEP1_METJA Methanocaldococcus jannaschii 3 0.7431
Mitochondrial dynamics protein MIEF1 Q9NQG6 MID51_HUMAN Homo sapiens 3 0.7426
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7409
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7396
Genome polyprotein A0EKU1 A0EKU1_9FLAV Meaban virus 3 0.7377
Bifunctional hemolysin/adenylate cyclase P0DKX7 CYAA_BORPE Bordetella pertussis 3 0.7361
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7361
Tyrosine-protein kinase JAK1 P23458 JAK1_HUMAN Homo sapiens 3 0.7358
LIM domain kinase 1 P53667 LIMK1_HUMAN Homo sapiens 2 0.7346
Mitogen-activated protein kinase kinase kinase 21 Q5TCX8 M3K21_HUMAN Homo sapiens 3 0.7342
Sulfide-quinone reductase B7JBP8 SQRD_ACIF2 Acidithiobacillus ferrooxidans) 3 0.7327
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7319
Thermolysin P00800 THER_BACTH Bacillus thermoproteolyticus 3 0.7294
3-hydroxyanthranilate 3,4-dioxygenase Q1LCS4 3HAO_CUPMC Cupriavidus metallidurans 2 0.7288
Serine/threonine-protein kinase SKY1 Q03656 SKY1_YEAST Saccharomyces cerevisiae 2 0.7262
Streptavidin P22629 SAV_STRAV Streptomyces avidinii 2 0.7232
Ephrin type-B receptor 2 P54763 EPHB2_MOUSE Mus musculus 2 0.7226
Histone-lysine N-methyltransferase SETD7 Q8WTS6 SETD7_HUMAN Homo sapiens 3 0.7222
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 2 0.7214
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7207
Methionine aminopeptidase 2 P9WK19 MAP12_MYCTU Mycobacterium tuberculosis 3 0.7206
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7205
Xylose isomerase P24300 XYLA_STRRU Streptomyces rubiginosus 3 0.7199
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 2 0.7182
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7176
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7175
Deoxycytidine kinase P27707 DCK_HUMAN Homo sapiens 3 0.7175
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7162
Vitamin D3 dihydroxylase P18326 CPXE_STRGO Streptomyces griseolus 3 0.7159
Coagulation factor X P00742 FA10_HUMAN Homo sapiens 3 0.7159
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7158
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 2 0.7149
NAD(P)H-hydrate epimerase Q8K4Z3 NNRE_MOUSE Mus musculus 3 0.7145
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7142
Histone-lysine N-methyltransferase EHMT1 Q9H9B1 EHMT1_HUMAN Homo sapiens 3 0.7138
Hygromycin-B 4-O-kinase P00557 KHYB_ECOLX Escherichia coli 3 0.7138
Avidin P02701 AVID_CHICK Gallus gallus 2 0.7120
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7119
Histone-lysine N-methyltransferase 2C Q8NEZ4 KMT2C_HUMAN Homo sapiens 3 0.7116
Streptavidin P22629 SAV_STRAV Streptomyces avidinii 2 0.7115
3',5'-cyclic-AMP phosphodiesterase 4B Q07343 PDE4B_HUMAN Homo sapiens 3 0.7110
Guanylate kinase P15454 KGUA_YEAST Saccharomyces cerevisiae 3 0.7104
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7102
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7100
Regulatory protein SdiA P07026 SDIA_ECOLI Escherichia coli 4 0.7100
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7099
Eukaryotic translation initiation factor 4E P06730 IF4E_HUMAN Homo sapiens 5 0.7094
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7085
Eukaryotic translation initiation factor 4E type 3 Q9DBB5 IF4E3_MOUSE Mus musculus 3 0.7083
Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 Q8GZB6 SUVH4_ARATH Arabidopsis thaliana 3 0.7082
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 3 0.7079
[LysW]-aminoadipate kinase O50147 LYSZ_THET2 Thermus thermophilus 3 0.7077
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform P48736 PK3CG_HUMAN Homo sapiens 3 0.7071
Albumin P02768 ALBU_HUMAN Homo sapiens 2 0.7066
histone deacetylase A5H660 A5H660_SCHMA Schistosoma mansoni 3 0.7062
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.7060
ADP-ribosylation factor 1 P84077 ARF1_HUMAN Homo sapiens 2 0.7052
DNA ligase P43813 DNLJ_HAEIN Haemophilus influenzae 3 0.7051
Serine/threonine-protein kinase Chk2 O96017 CHK2_HUMAN Homo sapiens 2 0.7051
Histone-lysine N-methyltransferase EHMT1 Q9H9B1 EHMT1_HUMAN Homo sapiens 3 0.7040
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.7039
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7038
N-alpha-acetyltransferase 50 Q9GZZ1 NAA50_HUMAN Homo sapiens 3 0.7032
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7032
DNA ligase P43813 DNLJ_HAEIN Haemophilus influenzae 4 0.7028
Eukaryotic translation initiation factor 4E-1 P29557 IF4E1_WHEAT Triticum aestivum 4 0.7019
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 2 0.7017
Purine nucleoside phosphorylase DeoD-type B1JL34 DEOD_YERPY Yersinia pseudotuberculosis serotype O:3 2 0.7013
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 2 0.7003
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 2 0.7001

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