Myricoidoside B - Compound Card

Myricoidoside B

Select a section from the left sidebar

Myricoidoside B

Structure
Zoomed Structure
  • Family: Plantae - Lamiaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Monoterpene
Canonical Smiles OC/C=C(/CC/C=C(/C(=O)O[C@H]1C[C@]2([C@@H](C1=C)[C@@H](OC=C2C=O)O[C@@H]1OC(CO)[C@H]([C@@H](C1O)O)O)O)\C)\C
InChI InChI=1S/C26H36O12/c1-13(7-8-27)5-4-6-14(2)23(33)36-17-9-26(34)16(10-28)12-35-24(19(26)15(17)3)38-25-22(32)21(31)20(30)18(11-29)37-25/h6-7,10,12,17-22,24-25,27,29-32,34H,3-5,8-9,11H2,1-2H3/b13-7+,14-6+/t17-,18?,19-,20+,21-,22?,24-,25-,26-/m0/s1
InChIKey DIGWSKABMWSQRP-HQIRBZRMSA-N
Formula C26H36O12
HBA 12
HBD 6
MW 540.56
Rotatable Bonds 10
TPSA 192.44
LogP -0.87
Number Rings 3
Number Aromatic Rings 0
Heavy Atom Count 38
Formal Charge 0
Fraction CSP3 0.62
Exact Mass 540.22
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Clerodendrum myricoides Lamiaceae Plantae 54240

Showing of synonyms

  • Umereweneza D, Molel J.T, et al. (2021). Antiviral iridoid glycosides from Clerodendrum myricoides.. Fitoterapia, 2021, 155, 105055. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: C=C1CCC(C12)C=COC2OC3CCCCO3

Level: 1

Mol. Weight: 540.56 g/mol

Structure

SMILES: C=C1CCC(C12)C=COC2

Level: 0

Mol. Weight: 540.56 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 540.56 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.67
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.0
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-0.93

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.72
Plasma Protein Binding
54.64
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
5.01
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-3.26
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.74
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
6.39
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-921.96
Rat (Acute)
3.62
Rat (Chronic Oral)
3.32
Fathead Minnow
4.16
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
523.57
Hydration Free Energy
-3.1
Log(D) at pH=7.4
0.48
Log(P)
0.4
Log S
-1.39
Log(Vapor Pressure)
-12.3
Melting Point
128.83
pKa Acid
4.42
pKa Basic
3.46
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.9027
ADP-ribosylation factor 1 P84077 ARF1_HUMAN Homo sapiens 2 0.8470
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 3 0.8129
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 3 0.7856
Lysozyme C II P11941 LYSC2_ONCMY Oncorhynchus mykiss 3 0.7839
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7522
Chorismate mutase AroH P19080 AROH_BACSU Bacillus subtilis 2 0.7383
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7352
Genome polyprotein O92972 POLG_HCVJ4 Hepatitis C virus genotype 1b 3 0.7333
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7321
2-aminohexano-6-lactam racemase Q7M181 ACLR_ACHOB Achromobacter obae 2 0.7260
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 2 0.7248
Muconolactone Delta-isomerase Q8G9L0 Q8G9L0_RHOOP Rhodococcus opacus 2 0.7239
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 2 0.7220
Carnitine O-acetyltransferase P47934 CACP_MOUSE Mus musculus 2 0.7207
Transcriptional activator, LuxR/UhpA family of regulators Q7NQP7 Q7NQP7_CHRVO Chromobacterium violaceum 2 0.7207
Deacetoxycephalosporin C synthase P18548 CEFE_STRCL Streptomyces clavuligerus 2 0.7166
Chitinase Q54276 Q54276_SERMA Serratia marcescens 3 0.7149
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7130
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7117
Avidin P02701 AVID_CHICK Gallus gallus 2 0.7060
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase P19992 HSD_STREX Streptomyces exfoliatus 2 0.7047
Transcriptional activator, LuxR/UhpA family of regulators Q7NQP7 Q7NQP7_CHRVO Chromobacterium violaceum 2 0.7035
Nuclear receptor subfamily 5 group A member 2 O00482 NR5A2_HUMAN Homo sapiens 3 0.7018

Download SDF