8-benzoylthio-paenimetabolin-I - Compound Card

8-benzoylthio-paenimetabolin-I

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8-benzoylthio-paenimetabolin-I

Structure
Zoomed Structure
  • Family: Plantae - Lactobacillaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Monoterpene Glycoside
Canonical Smiles O=C(c1ccccc1)SCC1[C@H]2O[C@@]3([C@](O2)(C[C@H]1C(=O)C3)O)C
InChI InChI=1S/C17H18O5S/c1-16-8-13(18)11-7-17(16,20)22-15(21-16)12(11)9-23-14(19)10-5-3-2-4-6-10/h2-6,11-12,15,20H,7-9H2,1H3/t11-,12?,15+,16+,17-/m1/s1
InChIKey OLKANSZKOOGAPY-LKGUYIIYSA-N
Formula C17H18O5S
HBA 6
HBD 1
MW 334.39
Rotatable Bonds 3
TPSA 72.83
LogP 1.99
Number Rings 4
Number Aromatic Rings 1
Heavy Atom Count 23
Formal Charge 0
Fraction CSP3 0.53
Exact Mass 334.09
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Lactobacillus brevis Lactobacillaceae Plantae 1580

Showing of synonyms

  • Abdel-Hafez A.A, Meselhy M.R, et al. (1998). Potent Anticonvulsant Paeonimetabolin-I Derivatives Obtained by Incubation of Paeoniflorin and Thiol Compounds with Lactobacillus brevis.. Chemical & pharmaceutical bulletin, 1998, 46(9), 1486-7. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: c1ccccc1C(=O)SCC(C(O2)O3)C(C(=O)C4)CC3C24

Level: 1

Mol. Weight: 334.39 g/mol

Structure

SMILES: C12C3CC(C(=O)C1)CC(O2)O3

Level: 0

Mol. Weight: 334.39 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 334.39 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.75
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.49
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.13

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.93
Plasma Protein Binding
64.6
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
8.72
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.41
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.08
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.74
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-0.99
Rat (Acute)
3.18
Rat (Chronic Oral)
1.62
Fathead Minnow
3.98
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
385.79
Hydration Free Energy
-8.69
Log(D) at pH=7.4
1.76
Log(P)
1.74
Log S
-3.1
Log(Vapor Pressure)
-7.36
Melting Point
122.16
pKa Acid
5.9
pKa Basic
2.62
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Purine nucleoside phosphorylase DeoD-type P0ABP9 DEOD_ECO57 Escherichia coli O157:H7 3 0.9181
Purine nucleoside phosphorylase DeoD-type P0ABP8 DEOD_ECOLI Escherichia coli 3 0.9168
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.9051
2-aminohexano-6-lactam racemase Q7M181 ACLR_ACHOB Achromobacter obae 3 0.8906
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.8870
Purine nucleoside phosphorylase DeoD-type P0ABP9 DEOD_ECO57 Escherichia coli O157:H7 3 0.8812
Corticosteroid-binding globulin P08185 CBG_HUMAN Homo sapiens 3 0.8387
Purine nucleoside phosphorylase DeoD-type O34925 DEOD_BACSU Bacillus subtilis 3 0.8348
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.8132
Tetracycline repressor protein class H P51561 TETR8_PASMD Pasteurella multocida 3 0.7984
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 3 0.7962
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7865
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7832
Poly [ADP-ribose] polymerase 1 P09874 PARP1_HUMAN Homo sapiens 3 0.7829
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 3 0.7805
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7796
Purine nucleoside phosphorylase DeoD-type Q5EEL8 DEOD_BACCE Bacillus cereus 3 0.7794
cGMP-dependent protein kinase 1 Q13976 KGP1_HUMAN Homo sapiens 3 0.7727
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.7609
Disintegrin and metalloproteinase domain-containing protein 17 P78536 ADA17_HUMAN Homo sapiens 3 0.7571
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 3 0.7560
5-methylthioadenosine/S-adenosylhomocysteine deaminase Q7NZ90 Q7NZ90_CHRVO Chromobacterium violaceum 3 0.7558
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 2 0.7554
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7545
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 3 0.7526
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 2 0.7521
Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial Q8N5Z0 AADAT_HUMAN Homo sapiens 2 0.7505
Gag-Pol polyprotein P03367 POL_HV1BR Human immunodeficiency virus type 1 group M subtype B 2 0.7484
Nucleoside 2-deoxyribosyltransferase Q8RLY5 Q8RLY5_LACHE Lactobacillus helveticus 3 0.7483
Flavoredoxin Q72HI0 Q72HI0_THET2 Thermus thermophilus 2 0.7452
Prostaglandin F2a synthase Q8I6L9 Q8I6L9_TRYCR Trypanosoma cruzi 2 0.7434
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7428
2-phospho-L-lactate transferase Q8PVT6 COFD_METMA Methanosarcina mazei 2 0.7409
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.7405
2-phospho-L-lactate transferase Q8PVT6 COFD_METMA Methanosarcina mazei 2 0.7401
Stromelysin-1 P08254 MMP3_HUMAN Homo sapiens 2 0.7391
Purine nucleoside phosphorylase DeoD-type Q5EEL8 DEOD_BACCE Bacillus cereus 3 0.7375
ADP compounds hydrolase NudE P45799 NUDE_ECOLI Escherichia coli 2 0.7366
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 2 0.7360
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 2 0.7357
Phenylpyruvate C(3)-methyltransferase Q643C8 MPPJ_STRHY Streptomyces hygroscopicus 2 0.7355
Tryptophan synthase alpha chain P00929 TRPA_SALTY Salmonella typhimurium 3 0.7346
M17 leucyl aminopeptidase Q8IL11 Q8IL11_PLAF7 Plasmodium falciparum 3 0.7338
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 2 0.7337
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7328
L-lactate dehydrogenase A chain P04642 LDHA_RAT Rattus norvegicus 2 0.7319
Gastrotropin P51161 FABP6_HUMAN Homo sapiens 3 0.7318
Stromelysin-1 P08254 MMP3_HUMAN Homo sapiens 2 0.7310
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.7306
Purine nucleoside phosphorylase Q8I3X4 Q8I3X4_PLAF7 Plasmodium falciparum 3 0.7294
Prothrombin P00734 THRB_HUMAN Homo sapiens 2 0.7276
L-lactate dehydrogenase A chain P13491 LDHA_RABIT Oryctolagus cuniculus 2 0.7270
Oxygenase Q194P4 Q194P4_STRAA Streptomyces argillaceus 3 0.7260
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7259
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 2 0.7259
Amino-acid acetyltransferase Q5FAK7 Q5FAK7_NEIG1 Neisseria gonorrhoeae 2 0.7248
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 2 0.7241
Cytochrome P450 S6BVH1 S6BVH1_RHOER Rhodococcus erythropolis 3 0.7225
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 2 0.7223
Adenosine 5'-monophosphoramidase HINT1 P49773 HINT1_HUMAN Homo sapiens 3 0.7223
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 2 0.7222
D-alanyl-D-alanine carboxypeptidase P15555 DAC_STRSR Streptomyces sp 2 0.7206
Coagulation factor X P00742 FA10_HUMAN Homo sapiens 2 0.7203
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 2 0.7196
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 2 0.7195
Prothrombin P00734 THRB_HUMAN Homo sapiens 2 0.7194
Chymotrypsinogen A P00766 CTRA_BOVIN Bos taurus 3 0.7182
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 2 0.7176
Carbonic anhydrase 4 Q64444 CAH4_MOUSE Mus musculus 2 0.7175
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 2 0.7166
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.7156
Class B acid phosphatase Q540U1 APHA_SALTM Salmonella typhimurium 2 0.7155
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 2 0.7154
Ferric enterobactin-binding periplasmic protein FepB P0AEL6 FEPB_ECOLI Escherichia coli 3 0.7151
Carbonic anhydrase Q39588 Q39588_CHLRE Chlamydomonas reinhardtii 2 0.7149
Avidin P02701 AVID_CHICK Gallus gallus 2 0.7145
Catalase-peroxidase Q3JNW6 KATG_BURP1 Burkholderia pseudomallei 2 0.7145
Adenylate cyclase type 5 P30803 ADCY5_CANLF Canis lupus familiaris 3 0.7135
Thermolysin P00800 THER_BACTH Bacillus thermoproteolyticus 2 0.7134
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7125
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 3 0.7125
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7120
Acidic phospholipase A2 3 P60045 PA2A3_NAJSG Naja sagittifera 2 0.7120
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.7113
2',3'-cyclic-nucleotide 3'-phosphodiesterase P16330 CN37_MOUSE Mus musculus 2 0.7112
Thermolysin P00800 THER_BACTH Bacillus thermoproteolyticus 2 0.7111
Pyridoxal kinase O00764 PDXK_HUMAN Homo sapiens 2 0.7105
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7102
HTH-type transcriptional regulator EthR P9WMC1 ETHR_MYCTU Mycobacterium tuberculosis 3 0.7097
Inosine-5'-monophosphate dehydrogenase P50097 IMDH_TRIFO Tritrichomonas foetus 2 0.7096
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 2 0.7090
Poly [ADP-ribose] polymerase 1 P09874 PARP1_HUMAN Homo sapiens 2 0.7075
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7072
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7068
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 O88703 HCN2_MOUSE Mus musculus 3 0.7058
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 Q9Y3Q4 HCN4_HUMAN Homo sapiens 3 0.7053
Lactoperoxidase P80025 PERL_BOVIN Bos taurus 2 0.7048
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7034
Ceramide transfer protein Q9Y5P4 CERT_HUMAN Homo sapiens 2 0.7030
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 2 0.7029
Prothrombin P00734 THRB_HUMAN Homo sapiens 2 0.7021
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 2 0.7007

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