(7R,8S) dihydrodehydrodiconiferyl alcohol - Compound Card

(7R,8S) dihydrodehydrodiconiferyl alcohol

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(7R,8S) dihydrodehydrodiconiferyl alcohol

Structure
Zoomed Structure
  • Family: Plantae - Pinaceae
  • Kingdom: Plantae
  • Class: Lignan
    • Subclass: Neolignan
Canonical Smiles OCCCc1cc2c(c(c1)O)O[C@H]([C@@H]2CO)c1ccc(c(c1)OC)O
InChI InChI=1S/C19H22O6/c1-24-17-9-12(4-5-15(17)22)18-14(10-21)13-7-11(3-2-6-20)8-16(23)19(13)25-18/h4-5,7-9,14,18,20-23H,2-3,6,10H2,1H3/t14-,18+/m1/s1
InChIKey PKORXOLYTWDULG-KDOFPFPSSA-N
Formula C19H22O6
HBA 6
HBD 4
MW 346.38
Rotatable Bonds 6
TPSA 99.38
LogP 2.24
Number Rings 3
Number Aromatic Rings 2
Heavy Atom Count 25
Formal Charge 0
Fraction CSP3 0.37
Exact Mass 346.14
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Cedrus atlantica Pinaceae Plantae 123597

Showing of synonyms

  • Maya B, Abedini A, et al. (2017). A new δ-tocotrienolic acid derivative and other constituents from the cones of Cedrus atlantica and their in vitro antimicrobial activity. Phytochemistry Letters, 2017, 20, 252-258. [View]
Pubchem: 21722963
Nmrshiftdb2: 60032793

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)OC(C2)c3ccccc3

Level: 1

Mol. Weight: 346.38 g/mol

Structure

SMILES: C1COc(c12)cccc2

Level: 0

Mol. Weight: 346.38 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 346.38 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.12
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-5.12
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.37

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.98
Plasma Protein Binding
77.88
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
11.38
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.88
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
0.72
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.85
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-0.64
Rat (Acute)
2.11
Rat (Chronic Oral)
3.1
Fathead Minnow
4.11
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
441.66
Hydration Free Energy
-9.51
Log(D) at pH=7.4
2.17
Log(P)
1.08
Log S
-3.56
Log(Vapor Pressure)
-8.06
Melting Point
150.75
pKa Acid
7.78
pKa Basic
3.16
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.9316
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.9315
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 3 0.9057
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.9020
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.8950
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.8895
Serine/threonine-protein kinase 10 O94804 STK10_HUMAN Homo sapiens 3 0.8857
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8827
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8804
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8741
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.8717
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.8715
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8688
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8673
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8542
Biflaviolin synthase CYP158A1 Q9KZF5 C1581_STRCO Streptomyces coelicolor / M145) 3 0.8490
Adenosine 5'-monophosphoramidase HINT1 P49773 HINT1_HUMAN Homo sapiens 3 0.8436
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 3 0.8363
Secoisolariciresinol dehydrogenase Q94KL8 SILD_PODPE Podophyllum peltatum 4 0.8350
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8324
Proliferating cell nuclear antigen P12004 PCNA_HUMAN Homo sapiens 3 0.8316
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.8307
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 3 0.8305
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8302
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8302
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8299
Sulfide-quinone reductase B7JBP8 SQRD_ACIF2 Acidithiobacillus ferrooxidans) 3 0.8284
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8281
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.8182
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.8141
Lactoperoxidase A0A452E9Y6 PERL_CAPHI Capra hircus 3 0.8099
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.8093
Hypoxanthine phosphoribosyltransferase Q4DRC4 Q4DRC4_TRYCC Trypanosoma cruzi 3 0.8088
DNA gyrase subunit A P0AES5 GYRA_SHIFL Shigella flexneri 3 0.8078
Estrogen receptor P03372 ESR1_HUMAN Homo sapiens 4 0.8003
DNA polymerase III subunit epsilon P03007 DPO3E_ECOLI Escherichia coli 3 0.7970
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 3 0.7956
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7955
Cytochrome P450 Q93H81 Q93H81_STRAX Streptomyces avermitilis 3 0.7883
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 3 0.7869
Ribosome-inactivating protein 3 P25891 RIP3_MAIZE Zea mays 3 0.7800
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7790
Stromelysin-1 P08254 MMP3_HUMAN Homo sapiens 3 0.7777
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7763
Histone deacetylase 4 P56524 HDAC4_HUMAN Homo sapiens 3 0.7761
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7705
Norsolorinic acid synthase Q12053 AFLC_ASPPU Aspergillus parasiticus 3 0.7696
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform P48736 PK3CG_HUMAN Homo sapiens 3 0.7695
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7666
Gag-Pol polyprotein O12158 POL_HV192 Human immunodeficiency virus type 1 group M subtype C 3 0.7666
Thymidylate synthase P0A886 TYSY_ECO57 Escherichia coli O157:H7 3 0.7663
Gag-Pol polyprotein P03367 POL_HV1BR Human immunodeficiency virus type 1 group M subtype B 3 0.7651
Dual specificity mitogen-activated protein kinase kinase 1 Q02750 MP2K1_HUMAN Homo sapiens 3 0.7630
Adenylate cyclase 2 A0A2U2H3Y1 A0A384LKY8_YERPE Yersinia pestis 3 0.7618
Purine nucleoside phosphorylase DeoD-type P0ABP8 DEOD_ECOLI Escherichia coli 3 0.7613
Protein ppBat Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron VPI-5482 3 0.7599
GTP 3',8-cyclase P69848 MOAA_STAA8 Staphylococcus aureus 3 0.7576
S-adenosylmethionine decarboxylase proenzyme P17707 DCAM_HUMAN Homo sapiens 3 0.7574
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7561
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 3 0.7524
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7508
Rhodopsin kinase GRK1 P28327 GRK1_BOVIN Bos taurus 3 0.7478
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7474
Type II methyltransferase M.TaqI P14385 MTTA_THEAQ Thermus aquaticus 3 0.7465
Karilysin D0EM77 KLY_TANFA Tannerella forsythia 3 0.7461
Peroxisome proliferator-activated receptor gamma P37231 PPARG_HUMAN Homo sapiens 3 0.7451
TetR family transcriptional regulator Q58L87 Q58L87_MYCSM Mycolicibacterium smegmatis 3 0.7437
Gag-Pol polyprotein P03367 POL_HV1BR Human immunodeficiency virus type 1 group M subtype B 3 0.7434
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7408
Pteridine reductase 1 Q01782 PTR1_LEIMA Leishmania major 3 0.7388
Chitinase Q54276 Q54276_SERMA Serratia marcescens 3 0.7383
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7382
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7378
Dual specificity mitogen-activated protein kinase kinase 1 Q02750 MP2K1_HUMAN Homo sapiens 3 0.7378
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7373
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta P78356 PI42B_HUMAN Homo sapiens 3 0.7361
Uridine phosphorylase P0A1F6 UDP_SALTY Salmonella typhimurium 4 0.7359
Biflaviolin synthase CYP158A2 Q9FCA6 C1582_STRCO Streptomyces coelicolor / M145) 3 0.7352
Histone deacetylase 8 Q9BY41 HDAC8_HUMAN Homo sapiens 3 0.7349
Tyrosine-protein kinase Lck P06239 LCK_HUMAN Homo sapiens 3 0.7331
Phosphodiesterase Q8WQX9 Q8WQX9_9TRYP Trypanosoma brucei 3 0.7323
Genome polyprotein P26663 POLG_HCVBK Hepatitis C virus genotype 1b 3 0.7286
Gag-Pol polyprotein P03367 POL_HV1BR Human immunodeficiency virus type 1 group M subtype B 3 0.7283
cAMP-dependent protein kinase catalytic subunit alpha P00517 KAPCA_BOVIN Bos taurus 3 0.7272
Beta-glucuronidase P05804 BGLR_ECOLI Escherichia coli 3 0.7250
Genome polyprotein Q2YHF0 POLG_DEN4T Dengue virus type 4 3 0.7247
Cyclin-dependent kinase 9 P50750 CDK9_HUMAN Homo sapiens 3 0.7244
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7240
Pantothenate synthetase P9WIL5 PANC_MYCTU Mycobacterium tuberculosis 4 0.7235
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7217
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7213
Catechol O-methyltransferase P22734 COMT_RAT Rattus norvegicus 3 0.7196
Phytohormone-binding protein CSBP A0A1S3THR8 PHBP_VIGRR Vigna radiata var. radiata 3 0.7196
Lethal factor P15917 LEF_BACAN Bacillus anthracis 3 0.7192
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 2 0.7171
Alpha-ketoglutarate-dependent dioxygenase FTO Q9C0B1 FTO_HUMAN Homo sapiens 5 0.7169
ADP compounds hydrolase NudE P45799 NUDE_ECOLI Escherichia coli 2 0.7167
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7164
histidine kinase O32393 O32393_ARTPT Arthrospira platensis 3 0.7149
FMN-dependent NAD(P)H:quinone oxidoreductase 1 Q9I5F3 AZOR1_PSEAE Pseudomonas aeruginosa 2 0.7148
Vascular endothelial growth factor receptor 2 P35968 VGFR2_HUMAN Homo sapiens 3 0.7144
Decapping and exoribonuclease protein O70348 DXO_MOUSE Mus musculus 3 0.7140
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 2 0.7128
Cyclic GMP-AMP phosphodiesterase SMPDL3A Q92484 ASM3A_HUMAN Homo sapiens 2 0.7125
dTDP-fucosamine acetyltransferase Q8FBQ3 WECD_ECOL6 Escherichia coli O6:H1 3 0.7122
Methylmalonyl-CoA decarboxylase P52045 SCPB_ECOLI Escherichia coli 3 0.7119
dTDP-4-dehydrorhamnose 3,5-epimerase A0A6L7H6N0 A0A1S0QLH9_BACAN Bacillus anthracis 3 0.7100
Serine hydroxymethyltransferase Q7SIB6 Q7SIB6_GEOSE Geobacillus stearothermophilus 3 0.7077
Cytosolic purine 5'-nucleotidase P49902 5NTC_HUMAN Homo sapiens 2 0.7076
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7074
Hypoxanthine-guanine phosphoribosyltransferase P00492 HPRT_HUMAN Homo sapiens 3 0.7073
Kinesin-like protein KIF11 P52732 KIF11_HUMAN Homo sapiens 3 0.7070
Cytohesin-2 Q99418 CYH2_HUMAN Homo sapiens 3 0.7068
Aurora kinase A O14965 AURKA_HUMAN Homo sapiens 3 0.7066
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7045
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7044
YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein Q5SHN1 Q5SHN1_THET8 Thermus thermophilus 3 0.7037
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.7033
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7028
Ephrin type-A receptor 4 Q03137 EPHA4_MOUSE Mus musculus 4 0.7027
Leucine--tRNA ligase P07813 SYL_ECOLI Escherichia coli 3 0.7025
Histone deacetylase 8 Q9BY41 HDAC8_HUMAN Homo sapiens 3 0.7010

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