3-O-alpha-l-rhamnopyranosyl-(1→6)-beta-D-glucopyranosyljujubogenin-20-O-(2,3,4-O-triacetyl)-alpha-L-rhamnopyranoside - Compound Card

3-O-alpha-l-rhamnopyranosyl-(1→6)-beta-D-glucopyranosyljujubogenin-20-O-(2,3,4-O-triacetyl)-alpha-L-rhamnopyranoside

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3-O-alpha-l-rhamnopyranosyl-(1→6)-beta-D-glucopyranosyljujubogenin-20-O-(2,3,4-O-triacetyl)-alpha-L-rhamnopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Rhamnaceae
  • Kingdom: Plantae
  • Class: Saponin
    • Subclass: Dammarane Saponin
Canonical Smiles CC(=C[C@@H]1O[C@@]23OC[C@@]4(C2)[C@@H]([C@H]3[C@@](C1)(C)O[C@@H]1O[C@@H](C)[C@@H]([C@H]([C@H]1OC(=O)C)OC(=O)C)OC(=O)C)CC[C@H]1[C@@]4(C)CC[C@@H]2[C@]1(C)CC[C@@H](C2(C)C)O[C@@H]1O[C@H](CO[C@@H]2O[C@@H](C)[C@@H]([C@H]([C@H]2O)O)O)[C@H]([C@@H]([C@H]1O)O)O)C
InChI InChI=1S/C54H84O20/c1-24(2)19-30-20-52(12,74-48-44(70-29(7)57)43(69-28(6)56)42(26(4)67-48)68-27(5)55)45-31-13-14-34-50(10)17-16-35(49(8,9)33(50)15-18-51(34,11)53(31)22-54(45,73-30)65-23-53)72-47-41(63)39(61)37(59)32(71-47)21-64-46-40(62)38(60)36(58)25(3)66-46/h19,25-26,30-48,58-63H,13-18,20-23H2,1-12H3/t25-,26-,30-,31+,32+,33-,34+,35-,36-,37+,38+,39-,40+,41+,42-,43+,44+,45-,46+,47-,48-,50-,51+,52-,53-,54-/m0/s1
InChIKey QBFHRMPOFOZKOQ-WSCWRHILSA-N
Formula C54H84O20
HBA 20
HBD 6
MW 1053.25
Rotatable Bonds 11
TPSA 274.12
LogP 3.1
Number Rings 9
Number Aromatic Rings 0
Heavy Atom Count 74
Formal Charge 0
Fraction CSP3 0.91
Exact Mass 1052.56
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Ziziphus lotus Rhamnaceae Plantae 345809

Showing of synonyms

  • Maciuk A, Lavaud C, et al. (2004). Four New Dammarane Saponin from Zizyphus lotus. Journal of natural products, 2004, 67(10), 1639-43. [View] [PubMed]
Pubchem: 11297703

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1OCC2CCCC(O2)OC(C3)CCC4C3CCC5C4CCC(C567)C8C(C6)(OC7)OCCC8OC9CCCCO9

Level: 3

Mol. Weight: 1053.25 g/mol

Structure

SMILES: O1CCCCC1OCC2CCCC(O2)OC(C3)CCC4C3CCC5C4CCC(C567)C8C(C6)(OC7)OCCC8

Level: 2

Mol. Weight: 1053.25 g/mol

Structure

SMILES: O1CCCCC1OC2CCOC(C3)(OC4)C2C(C345)CCC6C5CCC7C6CCC(C7)OC8CCCCO8

Level: 2

Mol. Weight: 1053.25 g/mol

Structure

SMILES: C1CCOC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCC(C6)OC7CCCCO7

Level: 1

Mol. Weight: 1053.25 g/mol

Structure

SMILES: C1CCCC2C1CCC3C2CCC(C345)C6C(C4)(OC5)OCCC6OC7CCCCO7

Level: 1

Mol. Weight: 1053.25 g/mol

Structure

SMILES: O1CCCCC1COC2CCCCO2

Level: 1

Mol. Weight: 1053.25 g/mol

Structure

SMILES: C1CCOC(C2)(OC3)C1C(C234)CCC5C4CCC6C5CCCC6

Level: 0

Mol. Weight: 1053.25 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 1053.25 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.78
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
134243.01
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
17544778.81

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.61
Plasma Protein Binding
103.3
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
2.0
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Safe
Bioconcentration Factor
-408049.93
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.69
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
4.05
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-31842929707.22
Rat (Acute)
4.38
Rat (Chronic Oral)
69.81
Fathead Minnow
40194953.8
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
3581443034.41
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-1970.67
Log(P)
4.64
Log S
-4.59
Log(Vapor Pressure)
-117934934.29
Melting Point
224.91
pKa Acid
-859248.3
pKa Basic
-6889.72
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.7999
Prolyl tripeptidyl peptidase Q7MUW6 PTP_PORGI Porphyromonas gingivalis 3 0.7566

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